Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: shi
Entrez Gene ID: 45928
Gene Name: shibire
Gene Aliases: CG18102, DNM3, DYN, Ddyn, Ddyn3, Ddyn4, Dmel\CG18102, Dmel_CG18102, Dyn, Shi, Shibire, Vps1, anon-WO0153538.12, anon-WO0153538.13, anon-WO0153538.14, dDyn, dyn, dynamin, l(1)VII, l(1)shi, shibere, shu
Chromosome Location: Chr.X: 15892116 - 15906716 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0003392

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001042813.2	NP_001036278.1	11 - 12	2648	59
	NM_001042814.2	NP_001036279.1	11 - 12	2660	59
	NM_001169295.1	NP_001162766.1	11 - 12	2519	59
	NM_001169296.1	NP_001162767.1	10 - 11	2235	59
	NM_001169297.2	NP_001162768.1	11 - 12	2537	59
	NM_001272659.2	NP_001259588.1	12 - 13	2387	59
	NM_001272660.2	NP_001259589.1	12 - 13	2508	59
	NM_001298377.1	NP_001285306.1	12 - 13	2342	59
	NM_080114.4	NP_524853.2	10 - 11	2217	59
	NM_167470.3	NP_727910.1	11 - 12	2439	59
	NM_167471.5	NP_727911.1	11 - 12	2519	59
	NM_206742.1	NP_996465.1	11 - 12	2329	59
	NM_206743.2	NP_996466.1	11 - 12	2330	59
	NM_206744.3	NP_996467.1	11 - 12	2330	59
	NM_206745.3	NP_996468.1	11 - 12	2329	59
GenBank mRNA	BT010049.1	-	11 - 12	2496	59
GenBank mRNA	X59435.1	-	-	2235	59