Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: hoe1
Entrez Gene ID: 249663
Gene Name: hoepel1
Gene Aliases: BcDNA:GH02636, CG11918, CG12787, CG2831, Dmel\CG12787, Dmel_CG12787, Hoe1, hoe, hoe-1
Chromosome Location: Chr.2L: 4908581 - 4932384 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0041150

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001273130.1	NP_001260059.1	9 - 10	2925	79
	NM_001273131.1	NP_001260060.1	9 - 10	2853	79
	NM_001298678.1	NP_001285607.1	8 - 9	2652	79
	NM_135031.4	NP_608875.1	8 - 9	2637	79
	NM_135032.2	NP_608876.1	8 - 9	2570	79
	NM_164603.2	NP_723024.2	9 - 10	2781	79
	NM_175966.2	NP_787980.1	9 - 10	2865	79
	NM_175967.2	NP_787981.1	9 - 10	2903	79
	NM_175968.2	NP_787982.1	9 - 10	2849	79
GenBank mRNA	AF145605.1	-	8 - 9	2616	79
	AY050571.1	-	9 - 10	2868	79
	AY050572.1	-	8 - 9	2619	79
	BT016131.1	-	9 - 10	2868	79
	BT044574.1	-	8 - 9	2565	79
	BT126019.1	-	6 - 7	2088	79