Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: shakB
Entrez Gene ID: 33062
Gene Name: shaking B
Gene Aliases: 2, 3, 6, CG12678, CG1321, CG15451, CG32508, CG34358, Dmel\CG34358, Dmel_CG34358, E81, FBpp0111481, Pas, R-9-29, R9-29, SHAK-B, Shak B, Shak-B, ShakB, W3, inx8, l(1)19Eb, l(1)LB21, l(1)R-10-14, l(1)R-10-3, l(1)R-10-7, l(1)R-9-29, l(1)TH73, l(1)W3, l(1)W3b, lincRNA.1031, nj-156, nj156, pas, pass, shB, shak-B, shkB
Chromosome Location: Chr.X: 20761071 - 20927050 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0085387

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001144750.2	NP_001138222.1	1 - 2	252	104
	NM_001258858.2	NP_001245787.1	5 - 6	1363	104
	NM_001258859.2	NP_001245788.1	6 - 7	2227	104
	NM_001298574.1	NP_001285503.1	5 - 6	2468	104
	NM_078701.3	NP_523425.2	4 - 5	1659	104
	NM_134566.3	NP_608410.2	3 - 4	763	104