Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: aPKC
Entrez Gene ID: 47594
Gene Name: atypical protein kinase C
Gene Aliases: CG10261, CG30475, CG42783, DaPKC, Dmel\CG42783, Dmel_CG42783, PKCl, PKCzeta, a-PKC, aPKC zeta, aPKC-zeta, aPKCzeta, aPkc, alphaPKCzeta, apkc, daPKC, dapkc, i, l(2)k06403, pkc-3, psu
Chromosome Location: Chr.2R: 14944458 - 14962969 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0261854

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001043076.3	NP_001036541.1	9 - 10	2079	72
	NM_001043077.3	NP_001036542.1	7 - 8	1718	72
	NM_001043078.2	NP_001036543.1	7 - 8	1756	72
	NM_001043079.2	NP_001036544.1	7 - 8	1762	72
	NM_001043080.3	NP_001036545.1	9 - 10	2015	72
	NM_001202010.4	NP_001188939.1	9 - 10	3247	72
	NM_001202012.2	NP_001188941.1	8 - 9	1878	72
	NM_001274055.1	NP_001260984.1	9 - 10	3268	72
	NM_001274056.2	NP_001260985.1	7 - 8	1617	72
	NM_001274057.2	NP_001260986.1	7 - 8	1718	72
	NM_001274058.2	NP_001260987.1	7 - 8	1718	72
	NM_080153.5	NP_524892.2	9 - 10	2201	72
GenBank mRNA	BT056247.1	-	9 - 10	2178	72