Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: orb2
Entrez Gene ID: 39018
Gene Name: CG43782-PA
Gene Aliases: CG43113, CG43782, CG5735, Dmel\CG43782, Dmel_CG43782, Orb2, Orb2A, Orb2B, anon-WO0140519.222, cg5735
Chromosome Location: Chr.3L: 8937100 - 8954463 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0264307

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001274679.1	NP_001261608.1	6 - 6	2099	68
	NM_001370022.1	NP_001356977.1	5 - 5	2109	68
	NM_001370023.1	NP_001356978.1	5 - 5	2109	68
	NM_140009.3	NP_648266.1	5 - 5	2109	68
	NM_168300.3	NP_729427.1	5 - 5	2109	68
	NM_168301.3	NP_729428.1	5 - 5	2036	68
	NM_168302.3	NP_729429.1	2 - 2	1206	68
GenBank mRNA	AY052043.1	-	5 - 5	2017	68