Product Details

Assay Reference Genome
Location

Chr.16:46662412 on build GRCh38
Cytoband
16q11.2
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
55737
Gene Symbol
VPS35
Gene Name
VPS35 retromer complex component
Gene Aliases
MEM3, PARK17
Location
Chr.16:46657979-46689232 on build GRCh38
Assay Gene Location
Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
VPS35 NM_018206.5 15 1997 NP_060676.2
XM_005256045.3 14 1882 XP_005256102.1
XM_011523227.2 15 2727 XP_011521529.1
AF175265.1 15 1955 AAF89953.1
AF183418.1 14 1906 AAG09687.1
AF186382.1 15 1951 AAG40619.1
AF191298.2 15 1925 AAF02778.2
AK000395.1 3 358 BAA91137.1
AK001614.1 15 1945 BAA91790.1
AK023650.1 11 1508 BAB14626.1
AK223218.1 15 1916 BAD96938.1
AL136888.1 15 1945 CAB66822.1
AL512769.1 8 1002 CAC21686.1
AY007112.1 4 508 AAG01989.1
BC002414.2 14 1904 AAH02414.1
BC010362.1 15 1918 AAH10362.1
BC093036.1 15 1943 AAH93036.1
BX647213.1 10 2287 CAI46268.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv572536 Chr16:46660737 - 46693473 on Build GRCh38 Loss VPS35 ORC6
nsv526656 Chr16:46505480 - 46812751 on Build GRCh38 Gain ANKRD26P1 SHCBP1 VPS35 C16orf87 MYLK3 ORC6
nsv428327 Chr16:46523056 - 46684578 on Build GRCh38 Gain ANKRD26P1 SHCBP1 VPS35
dgv2975n100 Chr16:46429858 - 46768065 on Build GRCh38 Gain ANKRD26P1 SHCBP1 VPS35 MYLK3 ORC6
esv3571142 Chr16:46430577 - 46840772 on Build GRCh38 Gain ANKRD26P1 SHCBP1 VPS35 C16orf87 MYLK3 ORC6
esv3638534 Chr16:46547097 - 46716009 on Build GRCh38 Gain ANKRD26P1 SHCBP1 VPS35 MYLK3 ORC6

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