Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
C5orf56
Entrez Gene ID
441108
Gene Name
chromosome 5 open reading frame 56
Gene Aliases
-
Chromosome Location
Chr.5: 132410773 - 132476044 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_045116.1 3 - 4 87
GenBank mRNA AK128882.1 - 3 - 4 87
BM998490.1 - 1 - 2 400 87


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA HY125691.1 - 3 - 4 Chr. 5 - 132410812 - 132475736 [+] on Build GRCh38 87
GenBankmRNA DB481380.1 - 3 - 4 Chr. 5 - 132410821 - 132475716 [+] on Build GRCh38 87
GenBankmRNA BE503976.1 - 2 - 3 Chr. 5 - 132419821 - 132476019 [+] on Build GRCh38 87
GenBankmRNA AI806142.1 - 3 - 4 Chr. 5 - 132410989 - 132475949 [+] on Build GRCh38 87
GenBankmRNA DR422074.1 - 3 - 4 Chr. 5 - 132410636 - 132475721 [+] on Build GRCh38 87
GenBankmRNA AI223352.1 - 3 - 4 Chr. 5 - 132410989 - 132475855 [+] on Build GRCh38 87
GenBankmRNA W07522.1 - 373 Chr. - - [-] on Build 87
GenBankmRNA BG150529.1 - 3 - 4 Chr. 5 - 132410989 - 132475948 [+] on Build GRCh38 87
GenBankmRNA AF086145.1 - 1 - 2 375 Chr. 5 - 132410997 - 132476035 [-] on Build GRCh38 87
GenBankmRNA AI492605.1 - 3 - 4 Chr. 5 - 132411026 - 132475919 [+] on Build GRCh38 87
GenBankmRNA DB550203.2 - 3 - 4 Chr. 5 - 132410882 - 132476037 [+] on Build GRCh38 87
GenBankmRNA BE468151.1 - 3 - 4 Chr. 5 - 132410989 - 132475829 [+] on Build GRCh38 87
GenBankmRNA AA908231.1 - 2 - 3 Chr. 5 - 132419821 - 132475801 [+] on Build GRCh38 87
GenBankmRNA AI199574.1 - 3 - 4 Chr. 5 - 132410989 - 132475935 [+] on Build GRCh38 87
GenBankmRNA BF433500.1 - 2 - 3 Chr. 5 - 132419821 - 132475928 [+] on Build GRCh38 87
GenBankmRNA BP417787.1 - 3 - 4 Chr. 5 - 132411003 - 132475964 [+] on Build GRCh38 87
GenBankmRNA HY333503.1 - 1 - 2 411 Chr. 5 - 132449649 - 132476040 [-] on Build GRCh38 87
GenBankmRNA AI016603.1 - 3 - 4 Chr. 5 - 132410989 - 132475966 [+] on Build GRCh38 87
GenBankmRNA AA884245.1 - 3 - 4 Chr. 5 - 132410989 - 132475972 [+] on Build GRCh38 87
GenBankmRNA BE504018.1 - 2 - 3 Chr. 5 - 132419821 - 132476018 [+] on Build GRCh38 87
GenBankmRNA BG714655.1 - 3 - 4 Chr. 5 - 132410900 - 132476044 [+] on Build GRCh38 87
GenBankmRNA DA950760.1 - 3 - 4 Chr. 5 - 132410984 - 132476022 [+] on Build GRCh38 87
GenBankmRNA BE222408.1 - 3 - 4 Chr. 5 - 132410989 - 132475963 [+] on Build GRCh38 87
GenBankmRNA BM985103.1 - 1 - 2 397 Chr. 5 - 132410927 - 132476040 [-] on Build GRCh38 87
GenBankmRNA BE219608.1 - 3 - 4 Chr. 5 - 132410989 - 132475874 [+] on Build GRCh38 87
GenBankmRNA HY129371.1 - 3 - 4 Chr. 5 - 132410812 - 132475759 [+] on Build GRCh38 87


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream solute carrier family 22 member 5 SLC22A5 CDSP, OCTN2 -54.0kb Sense Chr. - 132369704 - 132395614 on Build GRCh38
Downstream interferon regulatory factor 1 IRF1 IRF-1, MAR 5.7kb Anti-sense Chr. - 132481609 - 132490789 on Build GRCh38

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