Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
SLC4A8
Entrez Gene ID
9498
Gene Name
solute carrier family 4 member 8
Gene Aliases
NBC3, NDCBE
Chromosome Location
Chr.12: 51391317 - 51515763 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001039960.2 NP_001035049.1 25 - 25 8466 99
NM_001258401.2 NP_001245330.1 25 - 25 8412 99
XM_011539010.1 XP_011537312.1 26 - 26 8521 99
XM_011539011.1 XP_011537313.1 26 - 26 8466 99
XM_011539014.2 XP_011537316.1 16 - 16 7119 99
XM_017020240.1 XP_016875729.1 26 - 26 8548 99
XM_017020242.1 XP_016875731.1 26 - 26 8535 99
GenBank mRNA AK124576.1 - 1 - 1 1664 99
AL137310.1 - 1 - 1 420 99


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA194498.1 - 1 89 Chr. 12 - 51512356 - 51512965 [+] on Build GRCh38 99
GenBankmRNA DA706356.1 - 1 387 Chr. 12 - 51512058 - 51512604 [+] on Build GRCh38 99
GenBankmRNA BI027986.1 - 1 76 Chr. 12 - 51512369 - 51512717 [+] on Build GRCh38 99
GenBankmRNA DA411335.1 - 1 393 Chr. 12 - 51512053 - 51512629 [+] on Build GRCh38 99
GenBankmRNA DA508842.1 - 1 210 Chr. 12 - 51512236 - 51512787 [+] on Build GRCh38 99
GenBankmRNA DA320541.1 - 1 270 Chr. 12 - 51512176 - 51512629 [+] on Build GRCh38 99


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream polypeptide N-acetylgalactosaminyltransferase 6 GALNT6 GALNAC-T6, GalNAcT6 -115.5kb Anti-sense Chr. - 51351870 - 51391955 on Build GRCh38
Downstream sodium voltage-gated channel alpha subunit 8 SCN8A CERIII, CIAT, EIEE13, MED, NaCh6, Nav1.6, PN4 74.4kb Sense Chr. - 51589959 - 51812865 on Build GRCh38

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