Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: BCORP1
Entrez Gene ID: 286554
Gene Name: BCL6 corepressor pseudogene 1
Gene Aliases: BCORL2
Chromosome Location: Chr.Y: 19455431 - 19503153 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_002923.2		3 - 4	505	85
RefSeq	NR_033732.1		3 - 4	505	85
GenBank mRNA	AK097140.1	-	3 - 4	505	85
	BC063452.1	-	3 - 4	488	85
	BC110520.1	-	2 - 3	380	85
	BC110521.1	-	2 - 3	380	85

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI827229.1	-	3 - 4	488		Chr. Y - 19473968 - 19503136 [-] on Build GRCh38	85
GenBankmRNA	DA874086.1	-	3 - 4	507		Chr. Y - 19474088 - 19503155 [-] on Build GRCh38	85
GenBankmRNA	DA938523.1	-	3 - 4	505		Chr. Y - 19474049 - 19503152 [-] on Build GRCh38	85
GenBankmRNA	DB146716.1	-	3 - 4	505		Chr. Y - 19474090 - 19503153 [-] on Build GRCh38	85
GenBankmRNA	DA946162.1	-	3 - 4	515		Chr. Y - 19474106 - 19503153 [-] on Build GRCh38	85

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	testis-specific transcript, Y-linked 14 (non-protein coding)	TTTY14	CYorf14, NCRNA00137, NCRNA00185, PRO2834, TTY14	-396.4kb	Sense	Chr. - 18872501 - 19077547 on Build GRCh38
Downstream	taxilin gamma pseudogene, Y-linked	TXLNGY	CYorf15A, CYorf15B, TXLNG2P	92.5kb	Anti-sense	Chr. - 19567358 - 19607170 on Build GRCh38

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