Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 8 - 9 911 107
NM_001286402.1 NP_001273331.1 8 - 9 914 107
NM_001286403.1 NP_001273332.1 7 - 8 764 107
NR_104444.1 8 - 9 911 107
XM_006720880.3 XP_006720943.2 8 - 9 1092 107
XM_011522484.2 XP_011520786.1 8 - 9 1092 107
XM_011522485.2 XP_011520787.1 8 - 9 1092 107
XM_011522486.2 XP_011520788.1 8 - 9 1094 107
XM_011522487.2 XP_011520789.1 7 - 8 829 107
XM_011522488.2 XP_011520790.1 8 - 9 2323 107
XM_011522489.2 XP_011520791.1 7 - 8 826 107
XM_011522490.2 XP_011520792.1 8 - 9 2321 107
XM_011522491.2 XP_011520793.1 8 - 9 1094 107
XM_011522492.2 XP_011520794.1 8 - 9 1040 107
XM_011522493.2 XP_011520795.1 8 - 9 1037 107
XM_011522494.2 XP_011520796.1 8 - 9 804 107
XM_011522495.2 XP_011520797.1 7 - 8 895 107
XM_011522496.2 XP_011520798.1 7 - 8 892 107
GenBank mRNA AF410154.1 - 8 - 9 916 107
AY084054.1 - 7 - 8 754 107
AY084055.1 - 8 - 9 901 107
AY699071.1 - 7 - 8 709 107
U18259.1 - 8 - 9 916 107
U18288.1 - 7 - 8 749 107
U31931.1 - 8 - 9 778 107
X74301.1 - 8 - 9 893 107

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