Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 11 - 12 2793 91
NM_001286402.1 NP_001273331.1 11 - 12 2796 91
XM_006720880.3 XP_006720943.2 11 - 12 2974 91
XM_011522484.2 XP_011520786.1 11 - 12 2974 91
XM_011522485.2 XP_011520787.1 11 - 12 2974 91
XM_011522486.2 XP_011520788.1 11 - 12 2976 91
XM_011522487.2 XP_011520789.1 10 - 11 2711 91
XM_011522488.2 XP_011520790.1 11 - 12 4205 91
XM_011522489.2 XP_011520791.1 10 - 11 2708 91
XM_011522490.2 XP_011520792.1 11 - 12 4203 91
XM_011522491.2 XP_011520793.1 11 - 12 2976 91
XM_011522492.2 XP_011520794.1 11 - 12 2922 91
XM_011522493.2 XP_011520795.1 11 - 12 2919 91
XM_011522494.2 XP_011520796.1 11 - 12 2686 91
XM_011522495.2 XP_011520797.1 10 - 11 2777 91
XM_011522496.2 XP_011520798.1 10 - 11 2774 91
GenBank mRNA AY699071.1 - 10 - 11 2591 91
U18259.1 - 11 - 12 2798 91
X74301.1 - 11 - 12 2775 91

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