Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 13 - 14 3020 85
NM_001286402.1 NP_001273331.1 13 - 14 3023 85
NM_001286403.1 NP_001273332.1 11 - 12 1268 85
NR_104444.1 11 - 12 1210 85
XM_006720880.3 XP_006720943.2 13 - 14 3201 85
XM_011522484.2 XP_011520786.1 13 - 14 3201 85
XM_011522485.2 XP_011520787.1 13 - 14 3201 85
XM_011522486.2 XP_011520788.1 13 - 14 3203 85
XM_011522487.2 XP_011520789.1 12 - 13 2938 85
XM_011522488.2 XP_011520790.1 13 - 14 4432 85
XM_011522489.2 XP_011520791.1 12 - 13 2935 85
XM_011522490.2 XP_011520792.1 13 - 14 4430 85
XM_011522491.2 XP_011520793.1 13 - 14 3203 85
XM_011522492.2 XP_011520794.1 13 - 14 3149 85
XM_011522493.2 XP_011520795.1 13 - 14 3146 85
XM_011522494.2 XP_011520796.1 13 - 14 2913 85
XM_011522495.2 XP_011520797.1 12 - 13 3004 85
XM_011522496.2 XP_011520798.1 12 - 13 3001 85
GenBank mRNA AF410154.1 - 13 - 14 3901 85
AY084054.1 - 11 - 12 1258 85
AY699071.1 - 12 - 13 2818 85
U18259.1 - 13 - 14 3025 85
X74301.1 - 13 - 14 3002 85

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