Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
XRN1
Entrez Gene ID
54464
Gene Name
5'-3' exoribonuclease 1
Gene Aliases
SEP1
Chromosome Location
Chr.3: 142306607 - 142448062 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001282857.1 NP_001269786.1 9 - 10 1158 135
NM_001282859.1 NP_001269788.1 9 - 10 1158 135
NM_019001.4 NP_061874.3 9 - 10 1158 135
XM_006713673.2 XP_006713736.1 9 - 10 1158 135
XM_011512919.2 XP_011511221.1 9 - 10 1158 135
XM_011512920.2 XP_011511222.1 9 - 10 1158 135
XM_011512922.2 XP_011511224.1 6 - 7 789 135
XM_017006640.1 XP_016862129.1 9 - 10 1158 135
XM_017006641.1 XP_016862130.1 9 - 10 1158 135
XM_017006642.1 XP_016862131.1 9 - 10 1158 135
GenBank mRNA AK096177.1 - 9 - 10 1158 135
AK123897.1 - 6 - 7 631 135
AK304312.1 - 6 - 7 789 135
AY137776.1 - 9 - 10 1040 135
BC039314.1 - 9 - 10 1106 135
BC048104.1 - 9 - 10 1065 135
BC078146.1 - 9 - 10 1070 135
BX640905.1 - 9 - 10 1107 135
CR627396.1 - 9 - 10 1110 135
CR749518.1 - 9 - 10 1088 135

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