Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
PPP4R1L
Entrez Gene ID
55370
Gene Name
protein phosphatase 4 regulatory subunit 1 like (pseudogene)
Gene Aliases
C20orf192, PPP4R1P1, PRO1085
Chromosome Location
Chr.20: 58232777 - 58309439 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_003505.3 2 - 3 61 72
GenBank mRNA AK057583.1 - 2 - 3 61 72
AK299330.1 - 1 - 2 55 72
BC100979.1 - 2 - 3 61 72
BC100980.1 - 2 - 3 61 72


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA HY003470.1 - 1 - 2 121 Chr. 20 - 58271368 - 58309351 [-] on Build GRCh38 72
GenBankmRNA DC415935.1 - 2 - 3 61 Chr. 20 - 58250933 - 58309439 [-] on Build GRCh38 72
GenBankmRNA DC417374.1 - 1 - 2 55 Chr. 20 - 58250929 - 58309273 [-] on Build GRCh38 72
GenBankmRNA DC423262.1 - 2 - 3 61 Chr. 20 - 58251769 - 58309438 [-] on Build GRCh38 72
GenBankmRNA DC423911.1 - 1 - 2 55 Chr. 20 - 58250927 - 58309273 [-] on Build GRCh38 72
GenBankmRNA DC334650.1 - 2 - 3 72 Chr. 20 - 58251769 - 58309450 [-] on Build GRCh38 72
GenBankmRNA DC295989.1 - 2 - 3 61 Chr. 20 - 58251758 - 58309439 [-] on Build GRCh38 72
GenBankmRNA DC422897.1 - 1 - 2 55 Chr. 20 - 58251755 - 58309273 [-] on Build GRCh38 72
GenBankmRNA HY014022.1 - 2 - 3 62 Chr. 20 - 58251784 - 58309439 [-] on Build GRCh38 72
GenBankmRNA HY010024.1 - 2 - 3 62 Chr. 20 - 58251823 - 58309439 [-] on Build GRCh38 72
GenBankmRNA DC322524.1 - 1 - 2 55 Chr. 20 - 58248242 - 58309273 [-] on Build GRCh38 72
GenBankmRNA DC372528.1 - 1 - 2 55 Chr. 20 - 58251786 - 58309273 [-] on Build GRCh38 72
GenBankmRNA HY090387.1 - 2 - 3 74 Chr. 20 - 58271368 - 58309451 [-] on Build GRCh38 72
GenBankmRNA DC389157.1 - 2 - 3 61 Chr. 20 - 58251755 - 58309438 [-] on Build GRCh38 72
GenBankmRNA BX422703.2 - 1 - 2 42 Chr. 20 - 58246221 - 58309264 [-] on Build GRCh38 72
GenBankmRNA DC308593.1 - 2 - 3 59 Chr. 20 - 58250931 - 58309435 [-] on Build GRCh38 72
GenBankmRNA HY099281.1 - 2 - 3 74 Chr. 20 - 58271375 - 58309451 [-] on Build GRCh38 72
GenBankmRNA DC412893.1 - 2 - 3 61 Chr. 20 - 58251757 - 58309439 [-] on Build GRCh38 72
GenBankmRNA DB101173.1 - 2 - 3 61 Chr. 20 - 58248221 - 58309439 [-] on Build GRCh38 72
GenBankmRNA DC373110.1 - 1 - 2 55 Chr. 20 - 58251777 - 58309273 [-] on Build GRCh38 72


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream ankyrin repeat domain 60 ANKRD60 C20orf86, bA196N14.3 -57.7kb Sense Chr. - 58216126 - 58228653 on Build GRCh38
Downstream RAB22A, member RAS oncogene family RAB22A 445.0 Anti-sense Chr. - 58309715 - 58367507 on Build GRCh38

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