Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
IKZF3
Entrez Gene ID
22806
Gene Name
IKAROS family zinc finger 3
Gene Aliases
AIO, AIOLOS, ZNFN1A3
Chromosome Location
Chr.17: 39757715 - 39864188 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001257408.1 NP_001244337.1 7 - 7 9388 128
NM_001257409.1 NP_001244338.1 6 - 6 9271 128
NM_001257410.1 NP_001244339.1 7 - 7 9229 128
NM_001257411.1 NP_001244340.1 6 - 6 9061 128
NM_001257412.1 NP_001244341.1 5 - 5 8944 128
NM_001257413.1 NP_001244342.1 4 - 4 8827 128
NM_001257414.1 NP_001244343.1 5 - 5 9088 128
NM_001284514.1 NP_001271443.1 9 - 9 9616 128
NM_001284515.1 NP_001271444.1 8 - 8 9448 128
NM_001284516.1 NP_001271445.1 3 - 3 9060 128
NM_012481.4 NP_036613.2 8 - 8 9490 128
NM_183228.2 NP_899051.1 7 - 7 9322 128
NM_183229.2 NP_899052.1 7 - 7 9373 128
NM_183230.2 NP_899053.1 7 - 7 9373 128
NM_183231.2 NP_899054.1 6 - 6 9205 128
NM_183232.2 NP_899055.1 6 - 6 9256 128
GenBank mRNA AI866838.1 - 1 - 1 128
AK128436.1 - 1 - 1 3410 128


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AI352635.1 - 1 Chr. 17 - 39757716 - 39757984 [+] on Build GRCh38 128
GenBankmRNA AI651987.1 - 1 Chr. 17 - 39757722 - 39758248 [+] on Build GRCh38 128
GenBankmRNA AI652520.1 - 1 Chr. 17 - 39757721 - 39758188 [+] on Build GRCh38 128
GenBankmRNA AA814312.1 - 1 Chr. 17 - 39757718 - 39758119 [+] on Build GRCh38 128
GenBankmRNA BF224028.1 - 1 Chr. 17 - 39757721 - 39758170 [+] on Build GRCh38 128
GenBankmRNA AI440085.1 - 1 Chr. 17 - 39757720 - 39758127 [+] on Build GRCh38 128
GenBankmRNA AW976312.1 - 1 Chr. 17 - 39757722 - 39758413 [+] on Build GRCh38 128
GenBankmRNA AI005501.1 - 1 Chr. 17 - 39757722 - 39757998 [+] on Build GRCh38 128
GenBankmRNA AI084063.1 - 1 Chr. 17 - 39757718 - 39758013 [+] on Build GRCh38 128
GenBankmRNA AA455291.1 - 1 Chr. 17 - 39757718 - 39758079 [+] on Build GRCh38 128
GenBankmRNA BF478186.1 - 1 Chr. 17 - 39757721 - 39758258 [+] on Build GRCh38 128
GenBankmRNA BE465606.1 - 1 Chr. 17 - 39757718 - 39758091 [+] on Build GRCh38 128
GenBankmRNA AI949630.1 - 1 Chr. 17 - 39757718 - 39758253 [+] on Build GRCh38 128
GenBankmRNA AI696088.1 - 1 Chr. 17 - 39757721 - 39758072 [+] on Build GRCh38 128
GenBankmRNA AA984896.1 - 1 Chr. 17 - 39757721 - 39758078 [+] on Build GRCh38 128
GenBankmRNA T96418.1 - Chr. - - [-] on Build 128
GenBankmRNA AW050810.1 - 1 Chr. 17 - 39757718 - 39758115 [+] on Build GRCh38 128
GenBankmRNA AA443988.1 - 1 Chr. 17 - 39757718 - 39758093 [+] on Build GRCh38 128
GenBankmRNA AA813912.1 - 1 Chr. 17 - 39757718 - 39758241 [+] on Build GRCh38 128
GenBankmRNA AW515727.1 - 1 Chr. 17 - 39757721 - 39758185 [+] on Build GRCh38 128
GenBankmRNA BM998817.1 - 1 278 Chr. 17 - 39757759 - 39758167 [-] on Build GRCh38 128
GenBankmRNA AW237204.1 - 1 Chr. 17 - 39757721 - 39758169 [+] on Build GRCh38 128
GenBankmRNA BQ027694.1 - 1 Chr. 17 - 39757718 - 39758309 [+] on Build GRCh38 128
GenBankmRNA BE465221.1 - 1 Chr. 17 - 39757721 - 39758127 [+] on Build GRCh38 128
GenBankmRNA BU430660.1 - 1 Chr. 17 - 39757786 - 39758111 [+] on Build GRCh38 128
GenBankmRNA AI762498.1 - 1 Chr. 17 - 39757724 - 39758247 [+] on Build GRCh38 128
GenBankmRNA BF195225.1 - 1 Chr. 17 - 39757719 - 39758082 [+] on Build GRCh38 128
GenBankmRNA AA428631.1 - 1 Chr. 17 - 39757721 - 39758126 [+] on Build GRCh38 128
GenBankmRNA AW515925.1 - 1 Chr. 17 - 39757722 - 39758174 [+] on Build GRCh38 128
GenBankmRNA AW341847.1 - 1 Chr. 17 - 39757718 - 39758157 [+] on Build GRCh38 128
GenBankmRNA AI962755.1 - 1 Chr. 17 - 39757715 - 39758133 [+] on Build GRCh38 128
GenBankmRNA DB348384.1 - 1 Chr. 17 - 39757716 - 39758257 [+] on Build GRCh38 128
GenBankmRNA BM987841.1 - 1 Chr. 17 - 39757718 - 39758263 [+] on Build GRCh38 128
GenBankmRNA T78905.1 - Chr. - - [-] on Build 128
GenBankmRNA AI769693.1 - 1 Chr. 17 - 39757722 - 39758264 [+] on Build GRCh38 128


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream growth factor receptor bound protein 7 GRB7 -10.4kb Anti-sense Chr. - 39737909 - 39747285 on Build GRCh38
Downstream zona pellucida binding protein 2 ZPBP2 ZPBPL 101.7kb Anti-sense Chr. - 39868164 - 39877896 on Build GRCh38

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