Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: CD44
Entrez Gene ID: 960
Gene Name: CD44 molecule (Indian blood group)
Gene Aliases: CDW44, CSPG8, ECMR-III, HCELL, HUTCH-I, IN, LHR, MC56, MDU2, MDU3, MIC4, Pgp1
Chromosome Location: Chr.11: 35138870 - 35232402 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_000610.3	NP_000601.3	13 - 14	2039	96
	NM_001001389.1	NP_001001389.1	12 - 13	1910	96
	NM_001001390.1	NP_001001390.1	7 - 8	1292	96
	XM_005253231.2	XP_005253288.1	13 - 14	1769	96
	XM_005253232.2	XP_005253289.1	13 - 14	1766	96
	XM_005253233.2	XP_005253290.1	12 - 13	1649	96
	XM_005253234.2	XP_005253291.1	12 - 13	1646	96
	XM_005253235.2	XP_005253292.1	12 - 13	1640	96
	XM_005253238.2	XP_005253295.1	9 - 10	1280	96
	XM_005253239.2	XP_005253296.1	9 - 10	1274	96
	XM_005253240.2	XP_005253297.1	8 - 9	1145	96
	XM_006718388.1	XP_006718451.1	13 - 14	1763	96
	XM_011520483.1	XP_011518785.1	11 - 12	1514	96
	XM_011520484.1	XP_011518786.1	11 - 12	1511	96
	XM_011520485.1	XP_011518787.1	11 - 12	1508	96
	XM_011520486.1	XP_011518788.1	8 - 9	1151	96
	XM_017018583.1	XP_016874072.1	12 - 13	1637	96
GenBank mRNA	AJ251595.1	-	13 - 14	1783	96
	AK304467.1	-	3 - 4	399	96
	AK307707.1	-	3 - 4	357	96
	AY101192.1	-	7 - 8	974	96
	BC004372.1	-	12 - 13	1607	96
	BG946113.1	-	3 - 4	285	96
	M83325.1	-	2 - 3	108	96
	M83326.1	-	2 - 3	210	96
	M83327.1	-	4 - 5	336	96
	M83328.1	-	4 - 5	342	96
	S66400.1	-	7 - 8	908	96
	S82326.1	-	4 - 5	168	96
	X55150.1	-	7 - 8	981	96
	X55938.1	-	3 - 4	309	96
	X56794.1	-	7 - 8	973	96
	X62739.1	-	7 - 8	809	96
	X66733.1	-	12 - 13	1605	96