Product Details

Assay Reference Genome
Location

Chr.17:28404890 on build GRCh38
Cytoband
17q11.2
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
113235
Gene Symbol
SLC46A1
Gene Name
solute carrier family 46 member 1
Gene Aliases
G21, HCP1, PCFT
Location
Chr.17:28394642-28406630 on build GRCh38
Assay Gene Location
Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SLC46A1 NM_001242366.2 2 905 NP_001229295.1
NM_080669.5 2 905 NP_542400.2
XM_005277786.3 2 905 XP_005277843.1
XM_017024110.1 3 864 XP_016879599.1
AK054669.1 2 903 BAB70789.1
AK074161.1 BAB84987.1
AK097194.1
AK295883.1 2 861
AL832613.2 1 213 CAD89945.1
BC010691.1 2 894 AAH10691.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1062056 Chr17:28376191 - 28452023 on Build GRCh38 Gain SLC46A1 SARM1
nsv1056839 Chr17:28348199 - 28428188 on Build GRCh38 Gain SLC46A1 SEBOX POLDIP2 SARM1 TMEM199 MIR4723 VTN
nsv574653 Chr17:28227749 - 28501479 on Build GRCh38 Gain KRT18P55 POLDIP2 PYY2 PPY2P TMEM97 LOC101926984 VTN RPS7P1 SLC13A2 SLC46A1 SEBOX LOC105371930 IFT20 SARM1 TNFAIP1 TMEM199 LOC105371712 MIR4723

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