Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
GGTA1P
Entrez Gene ID
2681
Gene Name
glycoprotein, alpha-galactosyltransferase 1 pseudogene
Gene Aliases
GGTA, GGTA1, GLYT2, a1/3GTP
Chromosome Location
Chr.9: 121455041 - 121500027 on Build GRCh38
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location Amplicon Length
RefSeq NR_003191.1
4 - 5 773 89
NR_045211.1
3 - 4 504 89
GenBank mRNA AF305838.1 -
2 - 3 117 89
AF378121.1 - LIT2093
alpha1,3GTP1		 4 - 5 503 89
AF378122.1 - LIT2094
alpha1,3GTP2		 4 - 5 503 89
AF378123.1 - LIT2095
alpha1,3GTP3		 4 - 5 503 89
DT220151.1 -
3 - 4 296 89


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA R24770.1 - 108 Chr. - - [-] on Build 89
GenBankmRNA DT220692.1 - 3 - 4 303 Chr. 9 - 121455701 - 121499826 [-] on Build GRCh38 89
GenBankmRNA BX402524.2 - 3 - 4 414 Chr. 9 - 121455388 - 121499939 [-] on Build GRCh38 89
GenBankmRNA DR006565.1 - 3 - 4 296 Chr. 9 - 121455653 - 121499816 [-] on Build GRCh38 89
GenBankmRNA BX405574.2 - 4 - 5 563 Chr. 9 - 121455658 - 121499816 [-] on Build GRCh38 89
GenBankmRNA BX405573.2 - 3 - 4 Chr. 9 - 121455058 - 121467912 [+] on Build GRCh38 89


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream stomatin STOM BND7, EPB7, EPB72 -90.9kb Sense Chr. - 121338988 - 121370304 on Build GRCh38
Downstream DAB2 interacting protein DAB2IP AF9Q34, AIP-1, AIP1, DIP1/2 103.6kb Anti-sense Chr. - 121566883 - 121785530 on Build GRCh38

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