Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: BBIP1
Entrez Gene ID: 92482
Gene Name: BBSome interacting protein 1
Gene Aliases: BBIP10, BBS18, NCRNA00081, bA348N5.3
Chromosome Location: Chr.10: 110898730 - 110919366 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001195304.1	NP_001182233.1	2 - 3	337	113
GenBank mRNA	AK021501.1	-	2 - 3	138	113
	AK307314.1	-	2 - 3	213	113
	BC105804.1	-	2 - 3	176	113

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BQ428704.1	-	2 - 3	175		Chr. 10 - 110900191 - 110919201 [-] on Build GRCh38	113
GenBankmRNA	CN388947.1	-	2 - 3	180		Chr. 10 - 110907683 - 110919209 [-] on Build GRCh38	113
GenBankmRNA	DC395605.1	-	2 - 3	213		Chr. 10 - 110900489 - 110919242 [-] on Build GRCh38	113
GenBankmRNA	AU117393.1	-	2 - 3	138		Chr. 10 - 110907287 - 110919167 [-] on Build GRCh38	113
GenBankmRNA	BU561307.1	-	2 - 3	141		Chr. 10 - 110900176 - 110919167 [-] on Build GRCh38	113

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	programmed cell death 4 (neoplastic transformation inhibitor)	PDCD4	H731	-7.7kb	Anti-sense	Chr. - 110871795 - 110900006 on Build GRCh38
Downstream	SHOC2, leucine rich repeat scaffold protein	SHOC2	SIAA0862, SOC2, SUR8	1.3kb	Anti-sense	Chr. - 110919370 - 111013667 on Build GRCh38

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