Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PTPRD
Entrez Gene ID
5789
Gene Name
protein tyrosine phosphatase, receptor type D
Gene Aliases
HPTP, HPTPD, HPTPDELTA, PTPD, RPTPDELTA
Chromosome Location
Chr.9: 8314246 - 10612840 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001040712.2 NP_001035802.1 22 - 23 3383 127
NM_001171025.1 NP_001164496.1 21 - 22 3392 127
NM_002839.3 NP_002830.1 38 - 39 5253 127
NM_130391.3 NP_569075.2 23 - 24 3392 127
NM_130392.3 NP_569076.2 23 - 24 3395 127
NM_130393.3 NP_569077.2 21 - 22 3365 127
XM_006716817.3 XP_006716880.1 39 - 40 5602 127
XM_006716823.2 XP_006716886.1 37 - 38 5548 127
XM_006716825.3 XP_006716888.1 37 - 38 5547 127
XM_006716827.3 XP_006716890.1 34 - 35 5487 127
XM_006716832.3 XP_006716895.1 31 - 32 4318 127
XM_006716833.3 XP_006716896.1 33 - 34 4320 127
XM_006716834.3 XP_006716897.1 31 - 32 4321 127
XM_006716835.3 XP_006716898.1 32 - 33 4311 127
XM_006716837.3 XP_006716900.1 31 - 32 4291 127
XM_006716838.3 XP_006716901.1 31 - 32 4290 127
XM_006716839.3 XP_006716902.1 30 - 31 4276 127
XM_011517992.2 XP_011516294.1 37 - 38 5544 127
XM_017014958.1 XP_016870447.1 39 - 40 5610 127
XM_017014959.1 XP_016870448.1 40 - 41 5682 127
XM_017014960.1 XP_016870449.1 38 - 39 5571 127
XM_017014961.1 XP_016870450.1 38 - 39 5555 127
XM_017014962.1 XP_016870451.1 30 - 31 4743 127
XM_017014963.1 XP_016870452.1 39 - 40 5607 127
XM_017014964.1 XP_016870453.1 39 - 40 5606 127
XM_017014965.1 XP_016870454.1 39 - 40 5609 127
XM_017014966.1 XP_016870455.1 38 - 39 5601 127
XM_017014967.1 XP_016870456.1 38 - 39 5596 127
XM_017014968.1 XP_016870457.1 38 - 39 5592 127
XM_017014969.1 XP_016870458.1 38 - 39 5592 127
XM_017014970.1 XP_016870459.1 38 - 39 5592 127
XM_017014971.1 XP_016870460.1 37 - 38 5581 127
XM_017014972.1 XP_016870461.1 38 - 39 5583 127
XM_017014973.1 XP_016870462.1 37 - 38 5577 127
XM_017014974.1 XP_016870463.1 38 - 39 5580 127
XM_017014975.1 XP_016870464.1 36 - 37 5566 127
XM_017014976.1 XP_016870465.1 38 - 39 5565 127
XM_017014977.1 XP_016870466.1 37 - 38 5566 127
XM_017014978.1 XP_016870467.1 38 - 39 5562 127
XM_017014979.1 XP_016870468.1 38 - 39 5561 127
XM_017014980.1 XP_016870469.1 36 - 37 5517 127
XM_017014981.1 XP_016870470.1 33 - 34 5473 127
XM_017014982.1 XP_016870471.1 34 - 35 4373 127
XM_017014983.1 XP_016870472.1 34 - 35 4370 127
XM_017014984.1 XP_016870473.1 33 - 34 4361 127
XM_017014985.1 XP_016870474.1 33 - 34 4355 127
XM_017014986.1 XP_016870475.1 33 - 34 4351 127
XM_017014987.1 XP_016870476.1 32 - 33 4336 127
XM_017014988.1 XP_016870477.1 32 - 33 4333 127
XM_017014989.1 XP_016870478.1 33 - 34 4327 127
XM_017014990.1 XP_016870479.1 33 - 34 4323 127
XM_017014991.1 XP_016870480.1 33 - 34 4323 127
XM_017014992.1 XP_016870481.1 32 - 33 4314 127
XM_017014993.1 XP_016870482.1 32 - 33 4309 127
XM_017014994.1 XP_016870483.1 32 - 33 4306 127
XM_017014995.1 XP_016870484.1 32 - 33 4312 127
GenBank mRNA AB208869.1 - 21 - 22 3209 127
AB211400.1 - 37 - 38 5221 127
AK296392.1 - 6 - 7 650 127
BC106713.1 - 21 - 22 3340 127
BC106714.1 - 23 - 24 3343 127
BC106715.2 - 23 - 24 3340 127
BC106716.1 - 21 - 22 3313 127
L38929.1 - 28 - 29 4663 127
X54133.1 - 18 - 19 3343 127

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