Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CCDC88A
Entrez Gene ID
55704
Gene Name
coiled-coil domain containing 88A
Gene Aliases
APE, GIRDIN, GIV, GRDN, HkRP1, KIAA1212
Chromosome Location
Chr.2: 55287817 - 55419921 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001135597.1 NP_001129069.1 30 - 31 5929 141
NM_001254943.1 NP_001241872.1 30 - 31 5929 141
NM_018084.4 NP_060554.3 29 - 30 5848 141
XM_005264418.4 XP_005264475.1 30 - 31 5635 141
XM_005264421.2 XP_005264478.1 29 - 30 5554 141
XM_011532965.2 XP_011531267.1 30 - 31 5635 141
XM_011532966.2 XP_011531268.1 30 - 31 5635 141
XM_011532967.2 XP_011531269.1 29 - 30 5551 141
XM_011532968.2 XP_011531270.1 30 - 31 5635 141
XM_017004476.1 XP_016859965.1 30 - 31 5632 141
XM_017004477.1 XP_016859966.1 29 - 30 5554 141
XM_017004478.1 XP_016859967.1 29 - 30 5551 141
XM_017004479.1 XP_016859968.1 28 - 29 5470 141
XM_017004480.1 XP_016859969.1 28 - 29 5410 141
XM_017004481.1 XP_016859970.1 30 - 31 5635 141
GenBank mRNA AB033038.2 - 12 - 13 1885 141
AB125644.1 - 29 - 30 5006 141
AB201172.1 - 30 - 31 5621 141
AK001254.1 - 12 - 13 1947 141
AK124603.1 - 4 - 5 598 141
AK124761.1 - 2 - 3 2944 141
AK299823.1 - 7 - 8 1003 141
BC032683.1 - 13 - 14 2152 141
BC132736.1 - 29 - 30 5203 141
BC144320.1 - 30 - 31 5284 141
BX537985.1 - 16 - 17 2615 141
BX538154.1 - 15 - 16 2454 141
BX647874.1 - 8 - 9 1163 141
BX648138.1 - 15 - 16 2576 141

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