Product Details

Assay Reference Genome
Location

Chr.17:28399828 on build GRCh38
Cytoband
17q11.2
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
23098
Gene Symbol
SARM1
Gene Name
sterile alpha and TIR motif containing 1
Gene Aliases
MyD88-5, SAMD2, SARM
Location
Chr.17:28371662-28401045 on build GRCh38
Assay Gene Location
Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SARM1 NM_015077.3 9 6088 NP_055892.2
AB011096.1 9 5340 BAA25450.1
AJ290445.1 9 5643 CAB90355.1
BG820141.1 1 441
Entrez Gene ID
113235
Gene Symbol
SLC46A1
Gene Name
solute carrier family 46 member 1
Gene Aliases
G21, HCP1, PCFT
Location
Chr.17:28394642-28406630 on build GRCh38
Assay Gene Location
Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SLC46A1 NM_001242366.2 NP_001229295.1
NM_080669.5 NP_542400.2
XM_005277786.3 XP_005277843.1
XM_017024110.1 XP_016879599.1
AK054669.1 BAB70789.1
AK074161.1 BAB84987.1
AK097194.1
AL832613.2 CAD89945.1
BC010691.1 AAH10691.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1062056 Chr17:28376191 - 28452023 on Build GRCh38 Gain SLC46A1 SARM1
nsv1056839 Chr17:28348199 - 28428188 on Build GRCh38 Gain TMEM199 MIR4723 VTN SLC46A1 POLDIP2 SEBOX SARM1
nsv574653 Chr17:28227749 - 28501479 on Build GRCh38 Gain KRT18P55 MIR4723 VTN LOC105371712 PPY2P TMEM199 PYY2 LOC105371930 RPS7P1 SLC46A1 TNFAIP1 IFT20 POLDIP2 SLC13A2 LOC101926984 SEBOX SARM1 TMEM97

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