Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CLK2P1
Entrez Gene ID
1197
Gene Name
CDC like kinase 2, pseudogene 1
Gene Aliases
CLK2P
Chromosome Location
Chr.7: 23584716 - 23586527 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_002711.3 1 - 1 349 164
GenBank mRNA BC022025.1 - 1 - 1 365 164


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB054291.1 - 1 368 Chr. 7 - 23586052 - 23586546 [-] on Build GRCh38 164
GenBankmRNA DB036023.1 - 1 336 Chr. 7 - 23585949 - 23586514 [-] on Build GRCh38 164
GenBankmRNA DB038453.1 - 1 357 Chr. 7 - 23585969 - 23586534 [-] on Build GRCh38 164
GenBankmRNA DB471104.1 - 1 345 Chr. 7 - 23586050 - 23586524 [-] on Build GRCh38 163
GenBankmRNA DB057698.1 - 1 356 Chr. 7 - 23586002 - 23586534 [-] on Build GRCh38 164
GenBankmRNA DB446583.1 - 1 346 Chr. 7 - 23586097 - 23586524 [-] on Build GRCh38 164
GenBankmRNA HY007936.1 - 1 349 Chr. 7 - 23585933 - 23586527 [-] on Build GRCh38 164
GenBankmRNA DB460497.1 - 1 360 Chr. 7 - 23586051 - 23586538 [-] on Build GRCh38 164
GenBankmRNA HY049493.1 - 1 361 Chr. 7 - 23586111 - 23586538 [-] on Build GRCh38 164
GenBankmRNA DB032385.1 - 1 374 Chr. 7 - 23585968 - 23586552 [-] on Build GRCh38 164
GenBankmRNA DB023440.1 - 1 392 Chr. 7 - 23586020 - 23586570 [-] on Build GRCh38 164
GenBankmRNA HY031637.1 - 1 375 Chr. 7 - 23586094 - 23586551 [-] on Build GRCh38 164
GenBankmRNA DB022984.1 - 1 361 Chr. 7 - 23586052 - 23586538 [-] on Build GRCh38 164
GenBankmRNA BM563567.1 - 338 Chr. - - [-] on Build 164
GenBankmRNA DB443950.1 - 1 360 Chr. 7 - 23586087 - 23586538 [-] on Build GRCh38 164
GenBankmRNA DB056472.1 - 1 Chr. 7 - 23586052 - 23586538 [-] on Build GRCh38 164
GenBankmRNA HY021239.1 - 1 343 Chr. 7 - 23586048 - 23586520 [-] on Build GRCh38 164
GenBankmRNA BG723070.1 - 1 335 Chr. 7 - 23585964 - 23586511 [-] on Build GRCh38 164
GenBankmRNA BG717579.1 - 365 Chr. - - [-] on Build 164
GenBankmRNA BG720946.1 - 1 364 Chr. 7 - 23585791 - 23586538 [-] on Build GRCh38 164
GenBankmRNA DB056280.1 - 1 360 Chr. 7 - 23586052 - 23586538 [-] on Build GRCh38 164
GenBankmRNA HY032935.1 - 1 332 Chr. 7 - 23586045 - 23586509 [-] on Build GRCh38 164
GenBankmRNA HY015400.1 - 1 250 Chr. 7 - 23585892 - 23586428 [-] on Build GRCh38 164
GenBankmRNA DB043867.1 - 1 361 Chr. 7 - 23585963 - 23586538 [-] on Build GRCh38 164
GenBankmRNA HY031139.1 - 1 343 Chr. 7 - 23586058 - 23586520 [-] on Build GRCh38 164
GenBankmRNA HY005607.1 - 1 343 Chr. 7 - 23586020 - 23586520 [-] on Build GRCh38 164
GenBankmRNA HY220942.1 - 1 297 Chr. 7 - 23586011 - 23586442 [-] on Build GRCh38 164
GenBankmRNA DB458507.1 - 1 360 Chr. 7 - 23586061 - 23586538 [-] on Build GRCh38 164
GenBankmRNA DB032346.1 - 1 353 Chr. 7 - 23586026 - 23586531 [-] on Build GRCh38 164
GenBankmRNA DB025100.1 - 1 360 Chr. 7 - 23585991 - 23586538 [-] on Build GRCh38 164


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream transformer 2 alpha homolog TRA2A AWMS1, HSU53209 -54.0kb Sense Chr. - 23504780 - 23532041 on Build GRCh38
Downstream coiled-coil domain containing 126 CCDC126 10.8kb Anti-sense Chr. - 23597333 - 23644708 on Build GRCh38

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