Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PTPRK
Entrez Gene ID
5796
Gene Name
protein tyrosine phosphatase, receptor type K
Gene Aliases
R-PTP-kappa
Chromosome Location
Chr.6: 127968779 - 128520847 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001135648.2 NP_001129120.1 31 - 31 5963 135
NM_001291981.1 NP_001278910.1 33 - 33 6011 135
NM_001291984.1 NP_001278913.1 30 - 30 5942 135
NM_002844.3 NP_002835.2 30 - 30 5945 135
XM_006715537.2 XP_006715600.1 31 - 31 6011 135
XM_011536014.2 XP_011534316.1 33 - 33 6059 135
XM_011536015.2 XP_011534317.1 32 - 32 6050 135
XM_011536016.2 XP_011534318.1 32 - 32 5686 135
XM_011536017.2 XP_011534319.1 34 - 34 6302 135
XM_011536018.2 XP_011534320.1 34 - 34 5975 135
XM_017011145.1 XP_016866634.1 32 - 32 5978 135
XM_017011146.1 XP_016866635.1 32 - 32 5927 135
XM_017011147.1 XP_016866636.1 32 - 32 5905 135
XM_017011148.1 XP_016866637.1 31 - 31 5884 135
XM_017011149.1 XP_016866638.1 21 - 21 3563 135
XM_017011150.1 XP_016866639.1 20 - 20 3550 135
GenBank mRNA BQ018138.1 - 1 - 1 135
BX647498.1 - 8 - 8 2191 135
CR749277.1 - 30 - 30 5886 135
L77886.1 - 30 - 30 5641 135

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