Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SNORA80E
- Entrez Gene ID
-
677823
- Gene Name
- small nucleolar RNA, H/ACA box 80E
- Gene Aliases
-
ACA42, SNORA42
- Chromosome Location
-
Chr.1: 155919909 - 155920042 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_002974.1 |
|
1 - 1 |
70 |
76 |
| GenBank mRNA |
AJ609465.1 |
- |
1 - 1 |
70 |
76 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BU663871.1 |
- |
|
85 |
|
Chr. - - [-] on Build |
76 |
| GenBankmRNA |
DW418843.1 |
- |
1 |
90 |
|
Chr. 1 - 155918992 - 155920049 [-] on Build GRCh38 |
76 |
| GenBankmRNA |
BX482452.1 |
- |
1 |
|
|
Chr. 1 - 155919536 - 155920080 [+] on Build GRCh38 |
76 |
| GenBankmRNA |
DW454448.1 |
- |
1 |
91 |
|
Chr. 1 - 155919883 - 155920049 [-] on Build GRCh38 |
76 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
KIAA0907 |
KIAA0907 |
BLOM7 |
|
Sense |
Chr. - 155913043 - 155934442 on Build GRCh38 |
| Downstream |
small Cajal body-specific RNA 4 |
SCARNA4 |
ACA26 |
5.9kb
|
Sense |
Chr. - 155925958 - 155926086 on Build GRCh38 |
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