Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
GMCL1P1
Entrez Gene ID
64396
Gene Name
germ cell-less, spermatogenesis associated 1 pseudogene 1
Gene Aliases
GCL, GMCL1L, GMCL2
Chromosome Location
Chr.5: 178184510 - 178187432 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_003281.1 1 - 1 2745 147
GenBank mRNA BC024184.2 - 1 - 1 2732 147
BC024185.1 - 1 - 1 2740 147
BC033886.2 - 1 - 1 2745 147


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB523207.1 - 1 284 Chr. 5 - 178184510 - 178184971 [-] on Build GRCh38 147
GenBankmRNA DB516390.1 - 1 283 Chr. 5 - 178184510 - 178184970 [-] on Build GRCh38 147
GenBankmRNA DB509379.1 - 1 174 Chr. 5 - 178184510 - 178184861 [-] on Build GRCh38 147
GenBankmRNA DB511332.1 - 1 275 Chr. 5 - 178184510 - 178184963 [-] on Build GRCh38 147
GenBankmRNA DB524471.1 - 1 279 Chr. 5 - 178184495 - 178184966 [-] on Build GRCh38 147
GenBankmRNA HY244188.1 - 1 Chr. 5 - 178184510 - 178184992 [+] on Build GRCh38 147
GenBankmRNA HY241351.1 - 1 Chr. 5 - 178184510 - 178184983 [+] on Build GRCh38 147
GenBankmRNA HY234881.1 - 1 Chr. 5 - 178184499 - 178184906 [+] on Build GRCh38 147
GenBankmRNA DB509565.1 - 1 201 Chr. 5 - 178184510 - 178184888 [-] on Build GRCh38 147
GenBankmRNA DB509598.1 - 1 245 Chr. 5 - 178184504 - 178184932 [-] on Build GRCh38 147
GenBankmRNA DB516741.1 - 1 259 Chr. 5 - 178184504 - 178184946 [-] on Build GRCh38 147
GenBankmRNA HY201306.1 - 1 Chr. 5 - 178184510 - 178184977 [+] on Build GRCh38 147
GenBankmRNA DB524651.1 - 1 304 Chr. 5 - 178184504 - 178184991 [-] on Build GRCh38 147
GenBankmRNA DB510198.1 - 1 Chr. 5 - 178184510 - 178184944 [-] on Build GRCh38 145
GenBankmRNA DB520792.1 - 1 245 Chr. 5 - 178184504 - 178184932 [-] on Build GRCh38 147
GenBankmRNA HY244491.1 - 1 Chr. 5 - 178184510 - 178184977 [+] on Build GRCh38 147
GenBankmRNA DB522478.1 - 1 279 Chr. 5 - 178184504 - 178184966 [-] on Build GRCh38 147
GenBankmRNA HY223404.1 - 1 Chr. 5 - 178184510 - 178184973 [+] on Build GRCh38 147
GenBankmRNA HY230362.1 - 1 Chr. 5 - 178184510 - 178184902 [+] on Build GRCh38 147


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream NHP2 ribonucleoprotein NHP2 DKCB2, NHP2P, NOLA2 -30.6kb Sense Chr. - 178149463 - 178153960 on Build GRCh38
Downstream heterogeneous nuclear ribonucleoprotein A/B HNRNPAB ABBP1, HNRPAB 17.1kb Anti-sense Chr. - 178204507 - 178211183 on Build GRCh38

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