Product Details

Assay Reference Genome
Location

Chr.1:12172627 on build GRCh38
Cytoband
1p36.22
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

For this assay, SNP(s) [rs79823881] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID
7133
Gene Symbol
TNFRSF1B
Gene Name
TNF receptor superfamily member 1B
Gene Aliases
CD120b, TBPII, TNF-R-II, TNF-R75, TNFBR, TNFR1B, TNFR2, TNFR80, p75, p75TNFR
Location
Chr.1:12166948-12209222 on build GRCh38
Assay Gene Location
Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
TNFRSF1B NM_001066.2 NP_001057.1
XM_011542060.2 XP_011540362.1
XM_011542063.2 XP_011540365.1
XM_017002211.1 XP_016857700.1
XM_017002214.1 XP_016857703.1
XM_017002215.1 XP_016857704.1
AY148473.1 AAN72434.1
BC011844.2 AAH11844.1
BC042167.1 AAH42167.1
BC052977.1 AAH52977.1
BT019927.1 AAV38730.1
EU826615.1
M32315.1 AAA59929.1
M55994.1 AAA36755.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv471622 Chr1:12155207 - 12371588 on Build GRCh38 Gain+Loss MIR4632 VPS13D TNFRSF1B MIR7846
nsv508891 Chr1:12097920 - 12235045 on Build GRCh38 Insertion MIR4632 VPS13D TNFRSF8 TNFRSF1B MIR7846
esv3584475 Chr1:12134394 - 12217607 on Build GRCh38 Gain MIR4632 TNFRSF8 TNFRSF1B MIR7846
nsv527024 Chr1:12164182 - 12207208 on Build GRCh38 Loss MIR4632 TNFRSF1B MIR7846
nsv469830 Chr1:12039669 - 12199858 on Build GRCh38 Loss MIR4632 TNFRSF8 TNFRSF1B MIR7846

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