Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
SNRPN
Entrez Gene ID
6638
Gene Name
small nuclear ribonucleoprotein polypeptide N
Gene Aliases
HCERN3, PWCR, RT-LI, SM-D, SMN, SNRNP-N, SNURF-SNRPN, sm-N
Chromosome Location
Chr.15: 24823637 - 24978723 on Build GRCh38
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location Amplicon Length
GenBank mRNA AF400486.1 - LIT2209
IC-SNURF-SNRPN 3 prime noncoding transcripts		 19 - 20 2685 88
AF400487.1 - LIT2225
IC-SNURF-SNRPN 3 prime noncoding transcripts		 7 - 8 966 88


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB085429.1 - 1 - 2 78 Chr. 15 - 25093898 - 25098774 [+] on Build GRCh38 88
GenBankmRNA BY795871.2 - 1 - 2 121 Chr. 15 - 25093855 - 25099212 [+] on Build GRCh38 88
GenBankmRNA CD654912.1 - 4 - 5 559 Chr. 15 - 25087576 - 25097361 [+] on Build GRCh38 88
GenBankmRNA DA737283.1 - 3 - 4 494 Chr. 15 - 25089645 - 25098745 [+] on Build GRCh38 88
GenBankmRNA EB710200.1 - 4 - 5 Chr. 15 - 25089659 - 25099225 [-] on Build GRCh38 88


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream small nucleolar RNA, C/D box 116-24 SNORD116-24 HBII-85-24 Sense Chr. - 25094036 - 25094129 on Build GRCh38
Downstream small nucleolar RNA, C/D box 116-25 SNORD116-25 HBII-85-25 1.8kb Sense Chr. - 25097662 - 25097755 on Build GRCh38

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