Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PRKXP1
Entrez Gene ID
441733
Gene Name
protein kinase, X-linked, pseudogene 1
Gene Aliases
-
Chromosome Location
Chr.15: 100547752 - 100559283 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_073405.1 - 11376 102
GenBank mRNA AK095793.1 - 1 - 1 2252 103


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CR739669.1 - 1 Chr. 15 - 100547759 - 100548159 [+] on Build GRCh38 102
GenBankmRNA AI983986.1 - 1 Chr. 15 - 100547760 - 100548237 [+] on Build GRCh38 101
GenBankmRNA CF887624.1 - 1 98 Chr. 15 - 100547759 - 100548005 [-] on Build GRCh38 102
GenBankmRNA AI439088.1 - 1 Chr. 15 - 100547766 - 100548165 [+] on Build GRCh38 102
GenBankmRNA W31675.1 - Chr. - - [-] on Build 102
GenBankmRNA CF891602.1 - 1 Chr. 15 - 100547759 - 100547989 [+] on Build GRCh38 102
GenBankmRNA N39117.1 - 1 Chr. 15 - 100547761 - 100548163 [+] on Build GRCh38 102
GenBankmRNA DB317623.1 - 1 Chr. 15 - 100547767 - 100548312 [+] on Build GRCh38 103


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream ceramide synthase 3 CERS3 ARCI9, LASS3 -3.0kb Sense Chr. - 100400395 - 100544982 on Build GRCh38
Downstream uncharacterized LOC102723335 LOC102723335 8.5kb Anti-sense Chr. - 100558666 - 100559799 on Build GRCh38

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