Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- PVT1
- Entrez Gene ID
-
5820
- Gene Name
- Pvt1 oncogene (non-protein coding)
- Gene Aliases
-
LINC00079, MYC, NCRNA00079, onco-lncRNA-100
- Chromosome Location
-
Chr.8: 127794533 - 128101253 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| GenBank mRNA |
BX648921.1 |
- |
1 - 1 |
4346 |
70 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
AL046191.1 |
- |
1 |
197 |
|
Chr. 8 - 128100245 - 128100831 [+] on Build GRCh38 |
70 |
| GenBankmRNA |
AW754096.1 |
- |
1 |
130 |
|
Chr. 8 - 128100293 - 128100701 [+] on Build GRCh38 |
70 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
microRNA 1207 |
MIR1207 |
MIRN1207, hsa-mir-1207 |
-46.8kb
|
Sense |
Chr. - 128049152 - 128049238 on Build GRCh38 |
| Downstream |
microRNA 1208 |
MIR1208 |
MIRN1208, hsa-mir-1208 |
48.9kb
|
Sense |
Chr. - 128150116 - 128150188 on Build GRCh38 |
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