Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
OGFRL1
Entrez Gene ID
79627
Gene Name
opioid growth factor receptor like 1
Gene Aliases
dJ331H24.1
Chromosome Location
Chr.6: 71288296 - 71309059 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001324266.1 NP_001311195.1 7 - 7 4109 99
NM_024576.4 NP_078852.3 7 - 7 4106 99
XM_011536117.2 XP_011534419.1 7 - 7 4042 99
XM_011536118.2 XP_011534420.1 7 - 7 3891 99
XM_017011303.1 XP_016866792.1 7 - 7 3671 99
XM_017011304.1 XP_016866793.1 7 - 7 3668 99
XM_017011305.1 XP_016866794.1 7 - 7 3564 99
XM_017011306.1 XP_016866795.1 7 - 7 4594 99
GenBank mRNA AK124833.1 - 1 - 1 1846 99


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA111032.1 - 1 155 Chr. 6 - 71304150 - 71304734 [+] on Build GRCh38 99
GenBankmRNA BU687043.1 - 1 Chr. 6 - 71303927 - 71304585 [-] on Build GRCh38 99
GenBankmRNA BM907613.1 - 1 Chr. 6 - 71303638 - 71304585 [-] on Build GRCh38 99
GenBankmRNA BQ050211.1 - 1 287 Chr. 6 - 71304048 - 71304929 [+] on Build GRCh38 99
GenBankmRNA BM142486.1 - 1 Chr. 6 - 71304217 - 71304585 [-] on Build GRCh38 99
GenBankmRNA DA338001.1 - 1 125 Chr. 6 - 71304180 - 71304753 [+] on Build GRCh38 99
GenBankmRNA CN414805.1 - 1 300 Chr. 6 - 71304007 - 71304528 [+] on Build GRCh38 99
GenBankmRNA AA037529.1 - 1 155 Chr. 6 - 71304150 - 71304637 [+] on Build GRCh38 99
GenBankmRNA BM719261.1 - 1 333 Chr. 6 - 71303972 - 71304720 [+] on Build GRCh38 99


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream beta-1,3-glucuronyltransferase 2 B3GAT2 GLCATS -345.3kb Anti-sense Chr. - 70861366 - 70957085 on Build GRCh38
Downstream microRNA 30c-2 MIR30C2 MIRN30C2, mir-30c-2 71.4kb Anti-sense Chr. - 71376960 - 71377031 on Build GRCh38

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