Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SECISBP2
- Entrez Gene ID
-
79048
- Gene Name
- SECIS binding protein 2
- Gene Aliases
-
SBP2
- Chromosome Location
-
Chr.9: 89318473 - 89367117 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| GenBank mRNA |
AK127655.1 |
- |
1 - 1 |
2352 |
64 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BF433336.1 |
- |
1 |
|
|
Chr. 9 - 89355072 - 89355591 [-] on Build GRCh38 |
64 |
| GenBankmRNA |
DB282642.1 |
- |
1 |
488 |
|
Chr. 9 - 89354986 - 89355536 [+] on Build GRCh38 |
64 |
| GenBankmRNA |
DB321412.1 |
- |
1 |
|
|
Chr. 9 - 89355059 - 89355590 [-] on Build GRCh38 |
64 |
| GenBankmRNA |
AI498974.1 |
- |
1 |
|
|
Chr. 9 - 89355097 - 89355590 [-] on Build GRCh38 |
64 |
| GenBankmRNA |
DA222403.1 |
- |
1 |
72 |
|
Chr. 9 - 89355402 - 89356054 [+] on Build GRCh38 |
64 |
| GenBankmRNA |
BE674458.1 |
- |
1 |
|
|
Chr. 9 - 89355142 - 89355593 [-] on Build GRCh38 |
64 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
CDC28 protein kinase regulatory subunit 2 |
CKS2 |
CKSHS2 |
-36.4kb
|
Sense |
Chr. - 89311195 - 89316703 on Build GRCh38 |
| Downstream |
semaphorin 4D |
SEMA4D |
C9orf164, CD100, M-sema-G, SEMAJ, coll-4 |
5.2kb
|
Anti-sense |
Chr. - 89360791 - 89498065 on Build GRCh38 |
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