Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PSMD13
Entrez Gene ID
5719
Gene Name
proteasome 26S subunit, non-ATPase 13
Gene Aliases
HSPC027, Rpn9, S11, p40.5
Chromosome Location
Chr.11: 236675 - 252984 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA AK092845.1 - 1 - 1 1750 90


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA H50723.1 - 1 207 Chr. 11 - 252330 - 252619 [+] on Build GRCh38 90
GenBankmRNA AI762802.1 - 1 Chr. 11 - 252446 - 252981 [-] on Build GRCh38 90
GenBankmRNA AW374164.1 - 1 107 Chr. 11 - 252424 - 252757 [+] on Build GRCh38 91
GenBankmRNA AA779253.1 - 1 Chr. 11 - 252471 - 252981 [-] on Build GRCh38 90
GenBankmRNA BE646634.1 - 1 Chr. 11 - 252447 - 252981 [-] on Build GRCh38 90
GenBankmRNA BM974180.1 - 1 Chr. 11 - 252261 - 252984 [-] on Build GRCh38 90
GenBankmRNA DB334942.1 - 1 Chr. 11 - 252446 - 252984 [-] on Build GRCh38 90
GenBankmRNA DB332569.1 - 1 Chr. 11 - 252431 - 252983 [-] on Build GRCh38 90


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream sirtuin 3 SIRT3 SIR2L3 -14.4kb Anti-sense Chr. - 215030 - 236950 on Build GRCh38
Downstream NLR family pyrin domain containing 6 NLRP6 AVR, CLR11.4, NALP6, NAVR, NAVR/AVR, PAN3, PYPAF5 25.4kb Sense Chr. - 278365 - 285942 on Build GRCh38

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