Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: YBX3P1
Entrez Gene ID: 440359
Gene Name: Y-box binding protein 3 pseudogene 1
Gene Aliases: CSDAP1
Chromosome Location: Chr.16: 31567767 - 31569524 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_027011.1		1 - 1	1649	112
GenBank mRNA	AI183563.1	-	1 - 1		112

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CD243796.1	-	1	139		Chr. 16 - 31563931 - 31568011 [-] on Build GRCh38	111
GenBankmRNA	HY223748.1	-	1			Chr. 16 - 31567802 - 31568263 [+] on Build GRCh38	112

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	FSHD region gene 2 family member K, pseudogene	FRG2KP			Sense	Chr. - 31563222 - 31567715 on Build GRCh38
Downstream	clustered mitochondria homolog pseudogene 3	CLUHP3	C16orf67, KIAA0664L3, KIAA0664P3, URLC3	131.1kb	Anti-sense	Chr. - 31700613 - 31707437 on Build GRCh38

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