Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- CEP83-AS1
- Entrez Gene ID
-
144486
- Gene Name
- CEP83 antisense RNA 1 (head to head)
- Gene Aliases
-
CCDC41-AS1
- Chromosome Location
-
Chr.12: 94460003 - 94462570 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_027035.1 |
|
1 - 1 |
2249 |
88 |
| GenBank mRNA |
BC035086.2 |
- |
1 - 1 |
2231 |
88 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
AA746295.1 |
- |
1 |
112 |
|
Chr. 12 - 94462140 - 94462515 [+] on Build GRCh38 |
88 |
| GenBankmRNA |
AW612081.1 |
- |
1 |
|
|
Chr. 12 - 94462175 - 94462467 [-] on Build GRCh38 |
88 |
| GenBankmRNA |
DB527413.1 |
- |
1 |
230 |
|
Chr. 12 - 94462022 - 94462493 [+] on Build GRCh38 |
88 |
| GenBankmRNA |
AI701525.1 |
- |
1 |
|
|
Chr. 12 - 94462013 - 94462484 [-] on Build GRCh38 |
88 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
centrosomal protein 83 |
CEP83 |
CCDC41, NPHP18, NY-REN-58 |
-15.0
|
Anti-sense |
Chr. - 94268832 - 94459991 on Build GRCh38 |
| Downstream |
microRNA 5700 |
MIR5700 |
|
99.2kb
|
Sense |
Chr. - 94561789 - 94561859 on Build GRCh38 |
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