Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
NKD1
Entrez Gene ID
85407
Gene Name
naked cuticle homolog 1
Gene Aliases
Naked1
Chromosome Location
Chr.16: 50548330 - 50649249 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_033119.4 NP_149110.1 10 - 10 5701 85
XM_011523399.2 XP_011521701.1 13 - 13 6012 85
XM_011523400.2 XP_011521702.1 8 - 8 5303 85
XM_017023804.1 XP_016879293.1 12 - 12 7231 85
GenBank mRNA AK023784.1 - 1 - 1 253 85


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA389991.1 - 1 63 Chr. 16 - 50637783 - 50638379 [+] on Build GRCh38 85
GenBankmRNA AU140394.1 - 1 253 Chr. 16 - 50637593 - 50638043 [+] on Build GRCh38 85


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream bromodomain containing 7 BRD7 BP75, CELTIX1, NAG4 -268.6kb Anti-sense Chr. - 50317563 - 50368969 on Build GRCh38
Downstream sorting nexin 20 SNX20 SLIC1 25.6kb Anti-sense Chr. - 50666300 - 50681353 on Build GRCh38

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