Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

A Gene Symbol is not available because the non-coding assay was designed to a GenBank RNA or EST accession that does not map to an Entrez Gene ID.

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI005389.1	-	1			Chr. 13 - 110894022 - 110894408 [-] on Build GRCh38	66
GenBankmRNA	CR617865.1	-	1	1550		Chr. 13 - 110892698 - 110894380 [+] on Build GRCh38	66
GenBankmRNA	AV741360.1	-	1	373		Chr. 13 - 110893902 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV724634.1	-	1	395		Chr. 13 - 110893847 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV693186.1	-	1	184		Chr. 13 - 110894065 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	H38182.1	-	1			Chr. 13 - 110893995 - 110894405 [-] on Build GRCh38	66
GenBankmRNA	BF351536.1	-	1			Chr. 13 - 110893807 - 110894369 [+] on Build GRCh38	67
GenBankmRNA	AV724266.1	-	1	475		Chr. 13 - 110893778 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV736826.1	-	1	353		Chr. 13 - 110893902 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AW378651.1	-	1	462		Chr. 13 - 110893786 - 110894373 [+] on Build GRCh38	66
GenBankmRNA	AW451227.1	-	1			Chr. 13 - 110894184 - 110894414 [-] on Build GRCh38	66
GenBankmRNA	AI653505.1	-	1			Chr. 13 - 110893923 - 110894413 [-] on Build GRCh38	66
GenBankmRNA	BX413333.2	-	1			Chr. 13 - 110893911 - 110894380 [-] on Build GRCh38	66
GenBankmRNA	BX357497.2	-	1			Chr. 13 - 110893535 - 110894361 [-] on Build GRCh38	66
GenBankmRNA	AA682274.1	-	1			Chr. 13 - 110894039 - 110894417 [-] on Build GRCh38	66
GenBankmRNA	BI908041.1	-	1			Chr. 13 - 110893674 - 110894338 [-] on Build GRCh38	66
GenBankmRNA	AA778203.1	-	1			Chr. 13 - 110894116 - 110894403 [-] on Build GRCh38	66
GenBankmRNA	AV738212.1	-	1	275		Chr. 13 - 110893952 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV737027.1	-	1	271		Chr. 13 - 110893980 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	DR421641.1	-	1			Chr. 13 - 110893611 - 110894340 [-] on Build GRCh38	66
GenBankmRNA	AA825825.1	-	1			Chr. 13 - 110894008 - 110894417 [-] on Build GRCh38	66
GenBankmRNA	R98981.1	-				Chr. - - [-] on Build	66
GenBankmRNA	AV743991.1	-	1	342		Chr. 13 - 110893920 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV738864.1	-	1	173		Chr. 13 - 110894069 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV685355.2	-	1	197		Chr. 13 - 110894047 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AW500094.1	-	1			Chr. 13 - 110894029 - 110894425 [-] on Build GRCh38	66
GenBankmRNA	AV737317.1	-	1	287		Chr. 13 - 110893943 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AW074622.1	-	1			Chr. 13 - 110893999 - 110894409 [-] on Build GRCh38	66
GenBankmRNA	F02333.1	-				Chr. 4 - 91141811 - 91141826 [+] on Build GRCh38	66
GenBankmRNA	AI299364.1	-	1			Chr. 13 - 110893971 - 110894403 [-] on Build GRCh38	66
GenBankmRNA	AW968041.1	-	1			Chr. 13 - 110893727 - 110894403 [-] on Build GRCh38	66
GenBankmRNA	BF003130.1	-	1			Chr. 13 - 110894184 - 110894408 [-] on Build GRCh38	66
GenBankmRNA	AV740279.1	-	1	277		Chr. 13 - 110893998 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV686657.1	-	1	191		Chr. 13 - 110894054 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	Z39071.1	-				Chr. 15 - 79971113 - 79971132 [+] on Build GRCh38	66
GenBankmRNA	AV735913.1	-	1	284		Chr. 13 - 110893944 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	AV754789.1	-	1			Chr. 13 - 110893855 - 110894392 [-] on Build GRCh38	66
GenBankmRNA	CB242408.1	-	1			Chr. 13 - 110893726 - 110894421 [-] on Build GRCh38	66
GenBankmRNA	AI653497.1	-	1			Chr. 13 - 110893887 - 110894413 [-] on Build GRCh38	66
GenBankmRNA	AV683327.2	-	1	200		Chr. 13 - 110894047 - 110894418 [+] on Build GRCh38	66
GenBankmRNA	BE180752.1	-	1	185		Chr. 13 - 110894060 - 110894295 [+] on Build GRCh38	66

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	long intergenic non-protein coding RNA 346	LINC00346	C13orf29, NCRNA00346	-22.4kb	Anti-sense	Chr. - 110863987 - 110870308 on Build GRCh38
Downstream	long intergenic non-protein coding RNA 431	LINC00431		71.6kb	Sense	Chr. - 110966027 - 110990602 on Build GRCh38

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