Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
TPM4
Entrez Gene ID
7171
Gene Name
tropomyosin 4
Gene Aliases
HEL-S-108
Chromosome Location
Chr.19: 16067507 - 16103005 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_011528232.1 XP_011526534.1 1 - 1 1543 103
XM_017027189.1 XP_016882678.1 1 - 1 1543 103
GenBank mRNA AK096732.1 - 1 - 1 1543 103


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DW412736.1 - 1 151 Chr. 19 - 16080260 - 16080566 [+] on Build GRCh38 103
GenBankmRNA AW601586.1 - 2 Chr. 19 - 16080056 - 16082037 [-] on Build GRCh38 103
GenBankmRNA DW418909.1 - 1 151 Chr. 19 - 16080260 - 16080655 [+] on Build GRCh38 103


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream long intergenic non-protein coding RNA 905 LINC00905 -36.7kb Sense Chr. - 16033713 - 16042135 on Build GRCh38
Downstream RAB8A, member RAS oncogene family RAB8A MEL, RAB8 30.9kb Sense Chr. - 16111680 - 16133635 on Build GRCh38

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