Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
TTLL11
Entrez Gene ID
158135
Gene Name
tubulin tyrosine ligase like 11
Gene Aliases
C9orf20, bA244O19.1
Chromosome Location
Chr.9: 121815674 - 122093606 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_005251728.2 XP_005251785.1 8 - 8 8542 60
XM_005251729.4 XP_005251786.1 9 - 9 9619 60
GenBank mRNA AK123875.1 - 1 - 1 2554 60


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AA768228.1 - 1 Chr. 9 - 121815903 - 121816131 [+] on Build GRCh38 60
GenBankmRNA BE549909.1 - 1 Chr. 9 - 121815674 - 121816194 [+] on Build GRCh38 60
GenBankmRNA AW960966.1 - 1 304 Chr. 9 - 121815699 - 121816240 [-] on Build GRCh38 60
GenBankmRNA DB328293.1 - 1 Chr. 9 - 121815682 - 121816216 [+] on Build GRCh38 60
GenBankmRNA BM856073.1 - 1 80 Chr. 9 - 121815699 - 121816014 [-] on Build GRCh38 60
GenBankmRNA BE670837.1 - 1 Chr. 9 - 121815674 - 121816120 [+] on Build GRCh38 60
GenBankmRNA BU742222.1 - 1 Chr. 9 - 121815674 - 121816321 [+] on Build GRCh38 60
GenBankmRNA AI807223.1 - 1 Chr. 9 - 121815677 - 121816018 [+] on Build GRCh38 60
GenBankmRNA BE504526.1 - 1 Chr. 9 - 121815676 - 121816121 [+] on Build GRCh38 60
GenBankmRNA DB326404.1 - 1 Chr. 9 - 121815675 - 121816254 [+] on Build GRCh38 60
GenBankmRNA BM930062.1 - 1 275 Chr. 9 - 121815685 - 121816211 [-] on Build GRCh38 60
GenBankmRNA AI215787.1 - 1 Chr. 9 - 121815674 - 121816121 [+] on Build GRCh38 60
GenBankmRNA AI990932.1 - 1 Chr. 9 - 121815674 - 121816119 [+] on Build GRCh38 60
GenBankmRNA AA125801.1 - 1 Chr. 9 - 121815681 - 121816121 [+] on Build GRCh38 60
GenBankmRNA BE465303.1 - 1 Chr. 9 - 121815674 - 121816121 [+] on Build GRCh38 60
GenBankmRNA BQ028956.1 - 1 Chr. 9 - 121815677 - 121816081 [+] on Build GRCh38 60
GenBankmRNA AA617813.1 - 1 Chr. 9 - 121815692 - 121816172 [+] on Build GRCh38 60
GenBankmRNA AA625301.1 - 1 569 Chr. 9 - 121815884 - 121816505 [-] on Build GRCh38 60
GenBankmRNA DB329121.1 - 1 Chr. 9 - 121815675 - 121816210 [+] on Build GRCh38 60
GenBankmRNA BU743254.1 - 1 Chr. 9 - 121815674 - 121816212 [+] on Build GRCh38 60
GenBankmRNA AI203345.1 - 1 Chr. 9 - 121815674 - 121816092 [+] on Build GRCh38 60
GenBankmRNA BF446393.1 - 1 Chr. 9 - 121815675 - 121816189 [+] on Build GRCh38 60
GenBankmRNA N51004.1 - 1 Chr. 9 - 121815679 - 121816124 [+] on Build GRCh38 60
GenBankmRNA AI343839.1 - 1 Chr. 9 - 121815677 - 121816130 [+] on Build GRCh38 60
GenBankmRNA AI493083.1 - 1 Chr. 9 - 121815677 - 121816131 [+] on Build GRCh38 60
GenBankmRNA AA677885.1 - 1 Chr. 9 - 121815680 - 121816098 [+] on Build GRCh38 60


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream DAB2 interacting protein DAB2IP AF9Q34, AIP-1, AIP1, DIP1/2 -30.1kb Anti-sense Chr. - 121566883 - 121785530 on Build GRCh38
Downstream TTLL11 intronic transcript 1 TTLL11-IT1 C9orf148 66.1kb Sense Chr. - 121884611 - 121896783 on Build GRCh38

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