Product Details

Assay Reference Genome
Location

Chr.16:1355313 on build GRCh38
Cytoband
16p13.3
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
84572
Gene Symbol
GNPTG
Gene Name
N-acetylglucosamine-1-phosphate transferase gamma subunit
Gene Aliases
C16orf27, GNPTAG, LP2537, RJD9
Location
Chr.16:1351899-1363351 on build GRCh38
Assay Gene Location
Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr16:1270592 - 1519404 on Build GRCh38 Gain CCDC154 C16orf91 UBE2I TSR3 PTX4 LOC105371045 UNKL GNPTG IFT140 BAIAP3 TELO2 CLCN7
esv2422427 Chr16:10001 - 2723164 on Build GRCh38 Duplication SNORA10 SSTR5 NME3 MRPS34 ECI1 RNPS1 CEMP1 LOC100134368 HBA1 MIR3176 UNKL GNPTG TPSG1 SSTR5-AS1 TBC1D24 RHBDL1 TSC2 FAHD1 C16orf91 LOC105371049 PTX4 SNRNP25 AMDHD2 TPSD1 HBQ1 ABCA17P HN1L LUC7L PRSS27 GFER METTL26 MIR662 CASKIN1 RHOT2 HAGHL MSLN UBE2I LOC105371046 HBZ HBM NOXO1 PRSS29P MLST8 NUBP2 CCDC78 IFT140 METRN LOC105371047 STUB1 NME4 MIR6511B1 WASIR2 MCRIP2 RPL3L WDR24 LOC106660606 ARHGDIG MSRB1 RGS11 CACNA1H LINC00254 TPSAB1 MRPL28 WFIKKN1 RPL23AP5 TRAF7 LINC00235 RAB40C RPUSD1 ERVK13-1 LOC105371184 SNHG9 FBXL16 NARFL DNASE1L2 ABCA3 TSR3 FAM173A MEIOB SLC9A3R2 RAB26 CLCN7 PRR25 MIR3177 IGFALS TPSB2 PGP KCTD5 PIGQ TMEM204 FAM234A MIR6767 SNORA78 CHTF18 LMF1 HAGH MIR1225 SPSB3 MIR4717 RNF151 DECR2 PKD1 MIR4516 SNORD60 LMF1-AS1 LOC652276 TELO2 POLR3K LOC729652 JMJD8 MIR5587 C16orf59 BAIAP3 PRR35 MIR3178 HBA2 SNHG19 PDPK1 MAPK8IP3 NTN3 NHLRC4 RAB11FIP3 MPG MIR3180-5 FLJ42627 NPRL3 E4F1 NTHL1 MIR3677 TMEM8A SNORA64 LOC100287175 LOC105371038 MIR6768 LOC107984876 CCDC154 BRICD5 SYNGR3 NPW C1QTNF8 MIR6859-4 GNG13 TBL3 LOC101929280 PDIA2 ATP6V0C CAPN15 DDX11L10 HS3ST6 SOX8 MIR940 LOC107987233 ZNF598 CRAMP1 NDUFB10 EME2 AXIN1 RPS2 LOC105371045 WDR90 CCNF RHBDF1
nsv471066 Chr16:893361 - 1482836 on Build GRCh38 Loss CCDC154 C16orf91 SSTR5 C1QTNF8 UBE2I TSR3 LMF1 CACNA1H PRSS29P TPSAB1 LMF1-AS1 TPSD1 CLCN7 SOX8 TPSB2 LOC105371045 UNKL GNPTG TPSG1 BAIAP3 LOC107984876 SSTR5-AS1
dgv2692n100 Chr16:1002943 - 1394728 on Build GRCh38 Gain SSTR5 C1QTNF8 UBE2I TSR3 CACNA1H PRSS29P TPSAB1 TPSD1 TPSB2 UNKL GNPTG TPSG1 BAIAP3 SSTR5-AS1
nsv428316 Chr16:929650 - 1363252 on Build GRCh38 Gain+Loss SSTR5 C1QTNF8 UBE2I TSR3 LMF1 CACNA1H PRSS29P TPSAB1 LMF1-AS1 TPSD1 SOX8 TPSB2 UNKL GNPTG TPSG1 BAIAP3 SSTR5-AS1
nsv952899 Chr16:1142501 - 1535899 on Build GRCh38 Deletion CCDC154 C16orf91 UBE2I TSR3 CACNA1H PTX4 PRSS29P TPSAB1 IFT140 TPSD1 TELO2 LOC105371047 CLCN7 TPSB2 LOC105371045 UNKL GNPTG TMEM204 TPSG1 BAIAP3
nsv1046314 Chr16:1238517 - 1426464 on Build GRCh38 Loss C16orf91 UBE2I TSR3 PRSS29P TPSAB1 UNKL GNPTG BAIAP3 TPSD1

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