Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
BSCL2
Entrez Gene ID
26580
Gene Name
BSCL2, seipin lipid droplet biogenesis associated
Gene Aliases
GNG3LG, HMN5, PELD, SPG17
Chromosome Location
Chr.11: 62690262 - 62709619 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_037948.1 1 - 2 470 98
NR_037949.1 1 - 2 470 98
GenBank mRNA AK315423.1 - 1 - 2 387 98
BC009866.2 - 1 - 2 365 98
BP370169.1 - 1 - 2 469 98


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA969571.1 - 1 - 2 387 Chr. 11 - 62707210 - 62709536 [-] on Build GRCh38 98
GenBankmRNA BQ222204.1 - 1 - 2 353 Chr. 11 - 62705346 - 62709502 [-] on Build GRCh38 98
GenBankmRNA CA941537.1 - 1 - 2 317 Chr. 11 - 62707183 - 62709466 [-] on Build GRCh38 98
GenBankmRNA HY095081.1 - 1 - 2 363 Chr. 11 - 62707230 - 62709511 [-] on Build GRCh38 98
GenBankmRNA BX375495.2 - 1 - 2 364 Chr. 11 - 62705300 - 62709513 [-] on Build GRCh38 98
GenBankmRNA DB016639.1 - 1 - 2 329 Chr. 11 - 62707106 - 62709478 [-] on Build GRCh38 98
GenBankmRNA DB107899.1 - 1 - 2 390 Chr. 11 - 62707145 - 62709537 [-] on Build GRCh38 98
GenBankmRNA BG715990.1 - 1 - 2 379 Chr. 11 - 62705495 - 62709526 [-] on Build GRCh38 98
GenBankmRNA BQ213986.1 - 1 - 2 379 Chr. 11 - 62705348 - 62709517 [-] on Build GRCh38 98
GenBankmRNA CD634219.1 - 1 - 2 Chr. 11 - 62707206 - 62709486 [+] on Build GRCh38 98
GenBankmRNA DB055750.1 - 1 - 2 416 Chr. 11 - 62707194 - 62709563 [-] on Build GRCh38 98
GenBankmRNA CB106765.1 - 1 - 2 370 Chr. 11 - 62707208 - 62709519 [-] on Build GRCh38 98
GenBankmRNA DB108106.1 - 1 - 2 365 Chr. 11 - 62707106 - 62709514 [-] on Build GRCh38 98
GenBankmRNA DB257059.1 - 1 - 2 209 Chr. 11 - 62705473 - 62709358 [-] on Build GRCh38 98
GenBankmRNA DA014356.1 - 1 - 2 370 Chr. 11 - 62707146 - 62709519 [-] on Build GRCh38 98
GenBankmRNA DA379479.1 - 1 - 2 388 Chr. 11 - 62707175 - 62709537 [-] on Build GRCh38 98
GenBankmRNA BP252457.1 - 1 - 2 386 Chr. 11 - 62707127 - 62709535 [-] on Build GRCh38 98
GenBankmRNA HY018438.1 - 2 - 3 154 Chr. 11 - 62705491 - 62709615 [-] on Build GRCh38 98
GenBankmRNA DB027858.1 - 1 - 2 363 Chr. 11 - 62707108 - 62709511 [-] on Build GRCh38 98
GenBankmRNA BX400391.2 - 1 - 2 354 Chr. 11 - 62705300 - 62709503 [-] on Build GRCh38 98
GenBankmRNA DA381170.1 - 1 - 2 361 Chr. 11 - 62707148 - 62709510 [-] on Build GRCh38 98
GenBankmRNA BE798840.1 - 1 - 2 377 Chr. 11 - 62707123 - 62709503 [-] on Build GRCh38 98
GenBankmRNA DB127018.1 - 1 - 2 361 Chr. 11 - 62707121 - 62709510 [-] on Build GRCh38 98
GenBankmRNA DB126166.1 - 1 - 2 387 Chr. 11 - 62707159 - 62709536 [-] on Build GRCh38 98
GenBankmRNA DB029908.1 - 1 - 2 403 Chr. 11 - 62707143 - 62709551 [-] on Build GRCh38 98
GenBankmRNA CD243504.1 - 170 Chr. - - [-] on Build 98
GenBankmRNA DB184913.1 - 1 - 2 375 Chr. 11 - 62707127 - 62709522 [-] on Build GRCh38 98
GenBankmRNA DB114245.1 - 1 - 2 374 Chr. 11 - 62707141 - 62709523 [-] on Build GRCh38 98
GenBankmRNA BP329574.1 - 1 - 2 370 Chr. 11 - 62707115 - 62709519 [-] on Build GRCh38 98
GenBankmRNA DB056907.1 - 1 - 2 387 Chr. 11 - 62707180 - 62709536 [-] on Build GRCh38 98
GenBankmRNA DB193260.1 - 1 - 2 262 Chr. 11 - 62705528 - 62709411 [-] on Build GRCh38 98
GenBankmRNA DB048186.1 - 2 - 3 384 Chr. 11 - 62707150 - 62709845 [-] on Build GRCh38 98
GenBankmRNA CD634220.1 - 1 - 2 337 Chr. 11 - 62707208 - 62709486 [-] on Build GRCh38 98
GenBankmRNA DB057713.1 - 1 - 2 425 Chr. 11 - 62707211 - 62709574 [-] on Build GRCh38 98
GenBankmRNA DB058659.1 - 1 - 2 416 Chr. 11 - 62707206 - 62709563 [-] on Build GRCh38 98
GenBankmRNA CN402425.1 - 1 - 2 366 Chr. 11 - 62707193 - 62709513 [-] on Build GRCh38 98
GenBankmRNA DA840610.1 - 1 - 2 365 Chr. 11 - 62707151 - 62709513 [-] on Build GRCh38 98
GenBankmRNA DA562868.1 - 1 - 2 343 Chr. 11 - 62707149 - 62709492 [-] on Build GRCh38 98
GenBankmRNA DA906775.1 - 1 - 2 299 Chr. 11 - 62705566 - 62709448 [-] on Build GRCh38 98
GenBankmRNA DA933285.1 - 1 - 2 387 Chr. 11 - 62707150 - 62709536 [-] on Build GRCh38 98
GenBankmRNA AW403174.1 - 1 - 2 334 Chr. 11 - 62707233 - 62709476 [-] on Build GRCh38 98
GenBankmRNA BI857393.1 - 1 - 2 355 Chr. 11 - 62705311 - 62709503 [-] on Build GRCh38 98
GenBankmRNA DA925808.1 - 1 - 2 363 Chr. 11 - 62707106 - 62709511 [-] on Build GRCh38 98
GenBankmRNA DA582912.1 - 1 - 2 375 Chr. 11 - 62707106 - 62709522 [-] on Build GRCh38 98
GenBankmRNA BI600943.1 - 1 - 2 378 Chr. 11 - 62705403 - 62709526 [-] on Build GRCh38 98
GenBankmRNA BP276935.1 - 1 - 2 388 Chr. 11 - 62707157 - 62709537 [-] on Build GRCh38 98
GenBankmRNA DA924938.1 - 1 - 2 392 Chr. 11 - 62707141 - 62709537 [-] on Build GRCh38 98
GenBankmRNA DB047290.1 - 1 - 2 425 Chr. 11 - 62707196 - 62709574 [-] on Build GRCh38 98
GenBankmRNA CD557861.1 - 1 - 2 390 Chr. 11 - 62705446 - 62709539 [-] on Build GRCh38 98
GenBankmRNA DA523499.1 - 1 - 2 Chr. 11 - 62707257 - 62709536 [-] on Build GRCh38 98
GenBankmRNA BM454500.1 - 1 - 2 336 Chr. 11 - 62702508 - 62709485 [-] on Build GRCh38 98
GenBankmRNA BG818222.1 - 1 - 2 342 Chr. 11 - 62705310 - 62709476 [-] on Build GRCh38 98
GenBankmRNA DB059483.1 - 1 - 2 402 Chr. 11 - 62707196 - 62709551 [-] on Build GRCh38 98
GenBankmRNA BQ942387.1 - 1 - 2 84 Chr. 11 - 62692750 - 62709233 [-] on Build GRCh38 98
GenBankmRNA BP203300.1 - 1 - 2 387 Chr. 11 - 62707200 - 62709536 [-] on Build GRCh38 98
GenBankmRNA DA047943.1 - 1 - 2 367 Chr. 11 - 62705594 - 62709512 [-] on Build GRCh38 98
GenBankmRNA DB271372.1 - 1 - 2 383 Chr. 11 - 62707187 - 62709532 [-] on Build GRCh38 98
GenBankmRNA DA624520.1 - 1 - 2 310 Chr. 11 - 62707106 - 62709459 [-] on Build GRCh38 98
GenBankmRNA DB028798.1 - 1 - 2 414 Chr. 11 - 62707147 - 62709563 [-] on Build GRCh38 98
GenBankmRNA DA421825.1 - 1 - 2 Chr. 11 - 62707168 - 62709532 [-] on Build GRCh38 98
GenBankmRNA DA588041.1 - 1 - 2 374 Chr. 11 - 62707118 - 62709523 [-] on Build GRCh38 98
GenBankmRNA DA559191.1 - 1 - 2 375 Chr. 11 - 62707143 - 62709524 [-] on Build GRCh38 98
GenBankmRNA BP345916.1 - 1 - 2 225 Chr. 11 - 62705481 - 62709374 [-] on Build GRCh38 98
GenBankmRNA DA348487.1 - 1 - 2 383 Chr. 11 - 62707132 - 62709532 [-] on Build GRCh38 98
GenBankmRNA DA546318.1 - 1 - 2 383 Chr. 11 - 62707140 - 62709532 [-] on Build GRCh38 98
GenBankmRNA DB267986.1 - 1 - 2 Chr. 11 - 62707169 - 62709519 [-] on Build GRCh38 98
GenBankmRNA DA373651.1 - 1 - 2 388 Chr. 11 - 62707166 - 62709537 [-] on Build GRCh38 98
GenBankmRNA HY009782.1 - 1 - 2 384 Chr. 11 - 62707207 - 62709532 [-] on Build GRCh38 98
GenBankmRNA DA622392.1 - 1 - 2 372 Chr. 11 - 62707156 - 62709519 [-] on Build GRCh38 98
GenBankmRNA BP212607.1 - 1 - 2 387 Chr. 11 - 62707140 - 62709537 [-] on Build GRCh38 98
GenBankmRNA DA377756.1 - 1 - 2 359 Chr. 11 - 62705558 - 62709508 [-] on Build GRCh38 98
GenBankmRNA DB026445.1 - 1 - 2 387 Chr. 11 - 62707158 - 62709536 [-] on Build GRCh38 98
GenBankmRNA BI835156.1 - 1 - 2 369 Chr. 11 - 62705368 - 62709518 [-] on Build GRCh38 98
GenBankmRNA DB104348.1 - 1 - 2 385 Chr. 11 - 62707162 - 62709536 [-] on Build GRCh38 98
GenBankmRNA BM926492.1 - 1 - 2 200 Chr. 11 - 62692709 - 62709345 [-] on Build GRCh38 98
GenBankmRNA BJ993955.1 - 1 - 2 374 Chr. 11 - 62707226 - 62709523 [-] on Build GRCh38 98
GenBankmRNA DB040395.1 - 1 - 2 416 Chr. 11 - 62707199 - 62709564 [-] on Build GRCh38 98
GenBankmRNA BI907765.1 - 1 - 2 343 Chr. 11 - 62705473 - 62709493 [-] on Build GRCh38 98
GenBankmRNA DA987777.1 - 1 - 2 362 Chr. 11 - 62707117 - 62709511 [-] on Build GRCh38 98
GenBankmRNA DB053398.1 - 1 - 2 383 Chr. 11 - 62707138 - 62709532 [-] on Build GRCh38 98
GenBankmRNA DA380099.1 - 1 - 2 354 Chr. 11 - 62707139 - 62709503 [-] on Build GRCh38 98
GenBankmRNA DB248270.1 - 1 - 2 388 Chr. 11 - 62705591 - 62709537 [-] on Build GRCh38 98
GenBankmRNA DB005105.1 - 1 - 2 354 Chr. 11 - 62707144 - 62709503 [-] on Build GRCh38 98
GenBankmRNA CD634222.1 - 1 - 2 Chr. 11 - 62707208 - 62709429 [+] on Build GRCh38 98
GenBankmRNA DA838361.1 - 1 - 2 388 Chr. 11 - 62707153 - 62709536 [-] on Build GRCh38 98
GenBankmRNA DA377151.1 - 1 - 2 387 Chr. 11 - 62707168 - 62709536 [-] on Build GRCh38 98
GenBankmRNA CD634218.1 - 1 - 2 Chr. 11 - 62707208 - 62709511 [+] on Build GRCh38 98
GenBankmRNA BM561833.1 - 437 Chr. - - [-] on Build 98
GenBankmRNA DA603204.1 - 1 - 2 370 Chr. 11 - 62707147 - 62709519 [-] on Build GRCh38 98
GenBankmRNA DA422743.1 - 1 - 2 389 Chr. 11 - 62707159 - 62709536 [-] on Build GRCh38 98
GenBankmRNA DB032310.1 - 1 - 2 77 Chr. 11 - 62705331 - 62709226 [-] on Build GRCh38 98
GenBankmRNA DB002908.1 - 1 - 2 387 Chr. 11 - 62707167 - 62709536 [-] on Build GRCh38 98
GenBankmRNA CF142050.1 - 1 - 2 323 Chr. 11 - 62707133 - 62709464 [-] on Build GRCh38 98
GenBankmRNA DA957325.1 - 1 - 2 363 Chr. 11 - 62707120 - 62709511 [-] on Build GRCh38 98
GenBankmRNA DB497141.1 - 1 - 2 366 Chr. 11 - 62707223 - 62709515 [-] on Build GRCh38 98
GenBankmRNA CB996968.1 - 1 - 2 397 Chr. 11 - 62705409 - 62709523 [-] on Build GRCh38 98
GenBankmRNA DB032522.1 - 1 - 2 388 Chr. 11 - 62707149 - 62709536 [-] on Build GRCh38 98
GenBankmRNA HY167690.1 - 1 - 2 363 Chr. 11 - 62707227 - 62709511 [-] on Build GRCh38 98
GenBankmRNA BX378643.2 - 1 - 2 379 Chr. 11 - 62692696 - 62709528 [-] on Build GRCh38 98
GenBankmRNA DA471900.1 - 1 - 2 387 Chr. 11 - 62707148 - 62709536 [-] on Build GRCh38 98
GenBankmRNA DB192527.1 - 1 - 2 357 Chr. 11 - 62707128 - 62709505 [-] on Build GRCh38 98
GenBankmRNA HY038191.1 - 2 - 3 145 Chr. 11 - 62705536 - 62709606 [-] on Build GRCh38 98
GenBankmRNA DB026596.1 - 2 - 3 138 Chr. 11 - 62705426 - 62709600 [-] on Build GRCh38 98
GenBankmRNA BU956667.1 - 1 - 2 317 Chr. 11 - 62705343 - 62709466 [-] on Build GRCh38 98
GenBankmRNA DA621561.1 - 1 - 2 372 Chr. 11 - 62707149 - 62709521 [-] on Build GRCh38 98
GenBankmRNA DA558862.1 - 1 - 2 388 Chr. 11 - 62707156 - 62709537 [-] on Build GRCh38 98
GenBankmRNA DA746943.1 - 1 - 2 371 Chr. 11 - 62707131 - 62709519 [-] on Build GRCh38 98
GenBankmRNA HY073949.1 - 1 - 2 384 Chr. 11 - 62707202 - 62709532 [-] on Build GRCh38 98


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream HNRNPUL2-BSCL2 readthrough (NMD candidate) HNRNPUL2-BSCL2 Sense Chr. - 62690262 - 62727384 on Build GRCh38
Downstream heterogeneous nuclear ribonucleoprotein U like 2 HNRNPUL2 HNRPUL2, SAF-A2 3.0kb Sense Chr. - 62712625 - 62727385 on Build GRCh38

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