Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- ATP11A-AS1
- Entrez Gene ID
-
100874205
- Gene Name
- ATP11A antisense RNA 1
- Gene Aliases
-
-
- Chromosome Location
-
Chr.13: 112745449 - 112754731 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_109811.1 |
|
1 - 1 |
517 |
126 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
AL703766.1 |
- |
1 |
481 |
|
Chr. 13 - 112754094 - 112754693 [-] on Build GRCh38 |
126 |
| GenBankmRNA |
BF849117.1 |
- |
1 |
132 |
|
Chr. 13 - 112753903 - 112754349 [-] on Build GRCh38 |
126 |
| GenBankmRNA |
DB040448.1 |
- |
1 |
475 |
|
Chr. 13 - 112754134 - 112754690 [-] on Build GRCh38 |
126 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
ATP11A upstream neighbor |
ATP11AUN |
C13orf35, SMABLO1 |
-68.2kb
|
Anti-sense |
Chr. - 112647044 - 112684497 on Build GRCh38 |
| Downstream |
MCF.2 cell line derived transforming sequence like |
MCF2L |
ARHGEF14, DBS, OST |
139.6kb
|
Anti-sense |
Chr. - 112894378 - 113099739 on Build GRCh38 |
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