Product Details

Assay Reference Genome
Location

Chr.16:1354780 on build GRCh38
Cytoband
16p13.3
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
84572
Gene Symbol
GNPTG
Gene Name
N-acetylglucosamine-1-phosphate transferase gamma subunit
Gene Aliases
C16orf27, GNPTAG, LP2537, RJD9
Location
Chr.16:1351899-1363351 on build GRCh38
Assay Gene Location
Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr16:1270592 - 1519404 on Build GRCh38 Gain LOC105371045 TSR3 PTX4 CLCN7 GNPTG IFT140 BAIAP3 UBE2I C16orf91 CCDC154 UNKL TELO2
esv2422427 Chr16:10001 - 2723164 on Build GRCh38 Duplication MIR6768 MIR3177 LOC106660606 MSLN PGP ATP6V0C MIR3180-5 BRICD5 LOC100134368 ARHGDIG MIR4717 HAGH DDX11L10 PDIA2 C1QTNF8 AXIN1 NHLRC4 METRN SNORD60 CAPN15 GNPTG SNORA64 MRPS34 LMF1 JMJD8 RGS11 SSTR5-AS1 TMEM8A TPSAB1 TRAF7 DNASE1L2 SNRNP25 METTL26 RAB26 PTX4 LOC652276 NME4 RPL23AP5 TMEM204 HBM RAB40C NTHL1 RHOT2 LOC101929280 GNG13 SPSB3 TSR3 HBA1 MLST8 RHBDL1 IGFALS LOC729652 FAHD1 CEMP1 STUB1 NARFL SYNGR3 EME2 C16orf59 NPRL3 MIR4516 LINC00254 PRR25 RPL3L LOC105371047 NOXO1 WDR90 DECR2 MAPK8IP3 ZNF598 KCTD5 E4F1 CCDC78 HS3ST6 MSRB1 MEIOB HN1L UBE2I C16orf91 MRPL28 LOC100287175 NTN3 LOC105371184 SLC9A3R2 NME3 WFIKKN1 CLCN7 LOC105371038 SOX8 PDPK1 MCRIP2 WDR24 ECI1 LOC107987233 HBZ LOC105371046 MIR940 FBXL16 TPSB2 FAM173A MIR1225 PRSS29P LUC7L MIR3178 CASKIN1 CCNF IFT140 POLR3K MPG NPW HBA2 RNPS1 MIR5587 NUBP2 CACNA1H MIR6511B1 LINC00235 TPSG1 TPSD1 PKD1 SNORA78 SNHG19 LOC105371049 CHTF18 TBC1D24 PIGQ PRR35 RAB11FIP3 GFER MIR3677 MIR3176 RPS2 HAGHL BAIAP3 ERVK13-1 WASIR2 MIR6767 LMF1-AS1 MIR662 LOC105371045 RHBDF1 RNF151 FAM234A ABCA3 TBL3 NDUFB10 PRSS27 FLJ42627 CRAMP1 LOC107984876 MIR6859-4 SSTR5 AMDHD2 HBQ1 TSC2 SNHG9 CCDC154 RPUSD1 ABCA17P SNORA10 UNKL TELO2
nsv471066 Chr16:893361 - 1482836 on Build GRCh38 Loss LOC105371045 TPSB2 GNPTG PRSS29P UBE2I LMF1 C16orf91 SSTR5-AS1 TSR3 CLCN7 LOC107984876 SSTR5 SOX8 BAIAP3 C1QTNF8 TPSAB1 CACNA1H CCDC154 TPSG1 LMF1-AS1 UNKL TPSD1
dgv2692n100 Chr16:1002943 - 1394728 on Build GRCh38 Gain TPSB2 GNPTG PRSS29P UBE2I SSTR5-AS1 TSR3 SSTR5 BAIAP3 C1QTNF8 TPSAB1 CACNA1H TPSG1 UNKL TPSD1
nsv428316 Chr16:929650 - 1363252 on Build GRCh38 Gain+Loss TPSB2 GNPTG PRSS29P UBE2I LMF1 SSTR5-AS1 TSR3 SSTR5 SOX8 BAIAP3 C1QTNF8 TPSAB1 CACNA1H TPSG1 LMF1-AS1 UNKL TPSD1
nsv952899 Chr16:1142501 - 1535899 on Build GRCh38 Deletion LOC105371045 TPSB2 PTX4 GNPTG PRSS29P UBE2I LOC105371047 TMEM204 C16orf91 TSR3 CLCN7 IFT140 BAIAP3 TPSAB1 CACNA1H CCDC154 TPSG1 UNKL TPSD1 TELO2
nsv1046314 Chr16:1238517 - 1426464 on Build GRCh38 Loss TSR3 GNPTG PRSS29P BAIAP3 UBE2I C16orf91 TPSAB1 UNKL TPSD1

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