Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
Ccl27a
Entrez Gene ID
20301
Gene Name
chemokine (C-C motif) ligand 27A
Gene Aliases
ALP, AW558992, CTACK, CTAK, Ccl27, ESkine, ILC, PESKY, Scya27, Scya27a
Chromosome Location
Chr.4: 41769467 - 41774210 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001048179.1 NP_001041644.1 5 - 6 391 115
NM_011336.1 NP_035466.1 2 - 3 225 115
GenBank mRNA AB013398.1 - 2 - 3 225 115
AF082392.1 - 2 - 3 203 115
AF099931.1 - 2 - 3 213 115
AK005398.1 - 3 - 4 365 115
AK146066.1 - 2 - 3 1729 115
AY744155.1 - 1 - 2 344 115
BC107226.2 - 2 - 3 225 115
CA451425.1 - 5 - 6 391 115

Gene Symbol
Ccl27b
Entrez Gene ID
100040048
Gene Name
chemokine (C-C motif) ligand 27b
Gene Aliases
Ctack, ENSMUSG00000066202, Scya27b
Chromosome Location
Chr.4: 42650604 - 42656005 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001199959.1 NP_001186888.1 2 - 3 237 115
NM_001199960.1 NP_001186889.1 2 - 3 524 115
NM_001199961.1 NP_001186890.1 - 453 115
GenBank mRNA BY705727.1 - 2 - 3 237 115
CK346917.1 - 1 - 2 115

Gene Symbol
Gm13306
Entrez Gene ID
100039863
Gene Name
predicted gene 13306
Gene Aliases
OTTMUSG00000011352
Chromosome Location
Chr.4: 42153445 - 42158846 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001164046.1 NP_001157518.1 2 - 3 237 115
NM_001199962.1 NP_001186891.1 5 - 6 453 115
NM_001199963.1 NP_001186892.1 2 - 3 524 115
GenBank mRNA AK005520.1 - 2 - 3 237 115
BC028511.1 - 2 - 3 205 115
BM119446.2 - 1 - 2 115
BY652838.1 - 1 - 2 115

Gene Symbol
Gm2506
Entrez Gene ID
100039939
Gene Name
predicted gene 2506
Gene Aliases
-
Chromosome Location
Chr.4|NT_187054: 7 - 3814 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001199965.1 NP_001186894.1 2 - 3 237 115
NM_001199966.1 NP_001186895.1 2 - 3 524 115
GenBank mRNA BE632104.1 - 2 - 3 215 115
BM118988.2 - 1 - 2 115

Gene Symbol
LOC100861978
Entrez Gene ID
100861978
Gene Name
c-C motif chemokine 27-like
Gene Aliases
-
Chromosome Location
Chr.4|NT_187053: 16836 - 22237 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001267702.1 NP_001254631.1 5 - 6 453 115
NM_001267703.1 NP_001254632.1 2 - 3 524 115
NM_001267704.1 NP_001254633.1 2 - 3 237 115

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