Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
Meg3
Entrez Gene ID
17263
Gene Name
maternally expressed 3
Gene Aliases
2900016C05Rik, 3110050O07Rik, 6330408G06Rik, AI425946, AW108224, D12Bwg1266e, Gtl2, R74756, R75394
Chromosome Location
Chr.12: 109540996 - 109571729 on Build GRCm38
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location Amplicon Length
RefSeq NR_027652.1
2 - 3 258 68
GenBank mRNA BY134134.1 -
2 - 3 259 68
Y13832.1 - LIT3453
Gtl2		 2 - 3 249 68


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA W50752.1 - 2 - 3 240 Chr. 12 - 109541013 - 109544138 [+] on Build GRCm38 68
GenBankmRNA BY144638.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544118 [+] on Build GRCm38 68
GenBankmRNA BY788213.1 - 1 257 Chr. X - 88759964 - 88760320 [-] on Build GRCm38 68
GenBankmRNA BQ877622.1 - 255 Chr. - - [-] on Build 68
GenBankmRNA BQ829250.1 - 2 - 3 258 Chr. 12 - 109541008 - 109544338 [+] on Build GRCm38 68
GenBankmRNA BM502907.1 - 1 167 Chr. X - 88759718 - 88760230 [-] on Build GRCm38 68
GenBankmRNA CB525494.1 - 2 - 3 240 Chr. 12 - 109541014 - 109544385 [+] on Build GRCm38 68
GenBankmRNA BU511763.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA BY793741.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544121 [+] on Build GRCm38 68
GenBankmRNA BY790358.1 - 2 - 3 255 Chr. 12 - 109541002 - 109544116 [+] on Build GRCm38 68
GenBankmRNA AV504815.1 - 2 - 3 239 Chr. 12 - 109541014 - 109544301 [+] on Build GRCm38 68
GenBankmRNA BM503593.1 - 1 - 2 129 Chr. 12 - 109543726 - 109544414 [+] on Build GRCm38 68
GenBankmRNA BY143178.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544116 [+] on Build GRCm38 68
GenBankmRNA BY142903.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544106 [+] on Build GRCm38 68
GenBankmRNA AV453240.1 - 2 - 3 198 Chr. 12 - 109541056 - 109544325 [+] on Build GRCm38 68
GenBankmRNA AU051493.1 - 2 - 3 255 Chr. 12 - 109540999 - 109544451 [+] on Build GRCm38 68
GenBankmRNA BY135684.1 - 2 - 3 254 Chr. 12 - 109541001 - 109544146 [+] on Build GRCm38 68
GenBankmRNA BY261399.1 - 2 - 3 253 Chr. 12 - 109541002 - 109544225 [+] on Build GRCm38 68
GenBankmRNA BY775565.1 - 2 - 3 254 Chr. 12 - 109541001 - 109544133 [+] on Build GRCm38 68
GenBankmRNA BY281599.1 - 2 - 3 254 Chr. 12 - 109541001 - 109544182 [+] on Build GRCm38 68
GenBankmRNA W61993.1 - Chr. - - [-] on Build 68
GenBankmRNA BY275133.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544160 [+] on Build GRCm38 68
GenBankmRNA W78636.1 - 241 Chr. - - [-] on Build 68
GenBankmRNA BY310702.1 - 2 - 3 253 Chr. 12 - 109541002 - 109544130 [+] on Build GRCm38 68
GenBankmRNA BY792316.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544087 [+] on Build GRCm38 68
GenBankmRNA BY781228.1 - 2 - 3 260 Chr. 12 - 109540996 - 109544106 [+] on Build GRCm38 68
GenBankmRNA CB589497.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA BY341126.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544137 [+] on Build GRCm38 68
GenBankmRNA CB058596.1 - 2 - 3 245 Chr. 12 - 109541016 - 109544413 [+] on Build GRCm38 68
GenBankmRNA BY773887.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544147 [+] on Build GRCm38 68
GenBankmRNA AV454925.1 - 2 - 3 240 Chr. 12 - 109541014 - 109544265 [+] on Build GRCm38 68
GenBankmRNA BY261907.1 - 2 - 3 254 Chr. 12 - 109541002 - 109544206 [+] on Build GRCm38 68
GenBankmRNA CD806074.1 - 2 - 3 240 Chr. 12 - 109541014 - 109544434 [+] on Build GRCm38 68
GenBankmRNA CX237104.1 - 2 - 3 240 Chr. 12 - 109541014 - 109544414 [+] on Build GRCm38 68
GenBankmRNA CK031813.1 - 2 - 3 239 Chr. 12 - 109541015 - 109544437 [+] on Build GRCm38 68
GenBankmRNA BY779849.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544106 [+] on Build GRCm38 68
GenBankmRNA BX513488.1 - 2 - 3 220 Chr. 12 - 109541033 - 109544325 [+] on Build GRCm38 68
GenBankmRNA BY263102.1 - 2 - 3 253 Chr. 12 - 109541002 - 109544218 [+] on Build GRCm38 68
GenBankmRNA BY775286.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544139 [+] on Build GRCm38 68
GenBankmRNA BY284831.1 - 2 - 3 255 Chr. 12 - 109540999 - 109544198 [+] on Build GRCm38 68
GenBankmRNA BY277104.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544244 [+] on Build GRCm38 68
GenBankmRNA CN663660.1 - 2 - 3 192 Chr. 12 - 109541062 - 109544422 [+] on Build GRCm38 68
GenBankmRNA CK387301.1 - 2 - 3 239 Chr. 12 - 109541015 - 109544220 [+] on Build GRCm38 68
GenBankmRNA BQ934578.1 - 222 Chr. - - [-] on Build 68
GenBankmRNA BQ964844.1 - 240 Chr. - - [-] on Build 68
GenBankmRNA BY268903.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544183 [+] on Build GRCm38 68
GenBankmRNA BY146024.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544112 [+] on Build GRCm38 68
GenBankmRNA BM454071.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA BY266758.1 - 2 - 3 252 Chr. 12 - 109541001 - 109544171 [+] on Build GRCm38 68
GenBankmRNA BB610215.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544706 [+] on Build GRCm38 68
GenBankmRNA BU920898.1 - 2 - 3 229 Chr. 12 - 109541025 - 109544400 [+] on Build GRCm38 68
GenBankmRNA CB232587.1 - 2 - 3 258 Chr. 12 - 109540997 - 109544422 [+] on Build GRCm38 68
GenBankmRNA CK387479.1 - 2 - 3 239 Chr. 12 - 109541015 - 109544220 [+] on Build GRCm38 68
GenBankmRNA BM054348.1 - 2 - 3 224 Chr. 12 - 109541030 - 109544246 [+] on Build GRCm38 68
GenBankmRNA BU505470.1 - 241 Chr. - - [-] on Build 68
GenBankmRNA AU080290.1 - 2 - 3 255 Chr. 12 - 109540999 - 109544559 [+] on Build GRCm38 68
GenBankmRNA AV509066.1 - 1 157 Chr. X - 88759942 - 88760220 [-] on Build GRCm38 68
GenBankmRNA BY303102.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544134 [+] on Build GRCm38 68
GenBankmRNA BY305199.1 - 2 - 3 254 Chr. 12 - 109541001 - 109544116 [+] on Build GRCm38 68
GenBankmRNA CB589323.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA BY141581.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544105 [+] on Build GRCm38 68
GenBankmRNA BY098662.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544128 [+] on Build GRCm38 68
GenBankmRNA BY146168.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544115 [+] on Build GRCm38 68
GenBankmRNA BY104565.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544115 [+] on Build GRCm38 68
GenBankmRNA BY301737.1 - 2 - 3 259 Chr. 12 - 109540996 - 109544178 [+] on Build GRCm38 68
GenBankmRNA BY253871.1 - 2 - 3 253 Chr. 12 - 109541002 - 109544191 [+] on Build GRCm38 68
GenBankmRNA CA980715.1 - 234 Chr. - - [-] on Build 68
GenBankmRNA BQ828223.1 - 2 - 3 240 Chr. 12 - 109541012 - 109544382 [+] on Build GRCm38 68
GenBankmRNA BQ830039.1 - 2 - 3 243 Chr. 12 - 109541011 - 109544338 [+] on Build GRCm38 68
GenBankmRNA BY303088.1 - 1 77 Chr. X - 88759781 - 88760140 [-] on Build GRCm38 68
GenBankmRNA BY785382.1 - 2 - 3 254 Chr. 12 - 109541001 - 109544135 [+] on Build GRCm38 68
GenBankmRNA BQ832774.1 - 2 - 3 246 Chr. 12 - 109541010 - 109544388 [+] on Build GRCm38 68
GenBankmRNA BY098315.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544110 [+] on Build GRCm38 68
GenBankmRNA BY140039.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544128 [+] on Build GRCm38 68
GenBankmRNA BM502879.1 - 1 163 Chr. X - 88759669 - 88760226 [-] on Build GRCm38 68
GenBankmRNA BY781280.1 - 2 - 3 254 Chr. 12 - 109541001 - 109544110 [+] on Build GRCm38 68
GenBankmRNA BU151738.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA BY072692.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544138 [+] on Build GRCm38 68
GenBankmRNA CJ164769.1 - 1 257 Chr. X - 88759905 - 88760320 [-] on Build GRCm38 68
GenBankmRNA AV505497.1 - 2 - 3 239 Chr. 12 - 109541025 - 109544185 [+] on Build GRCm38 68
GenBankmRNA BG655394.1 - 2 - 3 246 Chr. 12 - 109541008 - 109544217 [+] on Build GRCm38 68
GenBankmRNA CA979451.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA BY267849.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544163 [+] on Build GRCm38 68
GenBankmRNA BY140319.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544100 [+] on Build GRCm38 68
GenBankmRNA W50765.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA CB233487.1 - 2 - 3 258 Chr. 12 - 109540997 - 109544459 [+] on Build GRCm38 68
GenBankmRNA BM943384.1 - 2 - 3 238 Chr. 12 - 109541014 - 109544421 [+] on Build GRCm38 68
GenBankmRNA CB202248.1 - 239 Chr. - - [-] on Build 68
GenBankmRNA CA326706.1 - 1 - 2 131 Chr. 12 - 109543723 - 109544599 [+] on Build GRCm38 68
GenBankmRNA BQ887157.1 - 100 Chr. - - [-] on Build 68
GenBankmRNA AW742662.1 - 2 - 3 231 Chr. 12 - 109541046 - 109544308 [+] on Build GRCm38 68
GenBankmRNA CK387913.1 - 2 - 3 239 Chr. 12 - 109541015 - 109544293 [+] on Build GRCm38 68
GenBankmRNA BY150467.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544127 [+] on Build GRCm38 68
GenBankmRNA BE573072.1 - 2 - 3 219 Chr. 12 - 109541034 - 109544547 [+] on Build GRCm38 68
GenBankmRNA BY328657.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544113 [+] on Build GRCm38 68
GenBankmRNA AV477071.1 - 2 - 3 244 Chr. 12 - 109541011 - 109544299 [+] on Build GRCm38 68
GenBankmRNA BF124526.1 - 1 219 Chr. X - 88759538 - 88760282 [-] on Build GRCm38 68
GenBankmRNA BM507392.1 - 2 - 3 235 Chr. 12 - 109541019 - 109544355 [+] on Build GRCm38 68
GenBankmRNA BY098652.1 - 2 - 3 253 Chr. 12 - 109541001 - 109544123 [+] on Build GRCm38 68


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream microRNA 1906-2 Mir1906-2 mmu-mir-1906-2 -228.0 Sense Chr. - 88759474 - 88759553 on Build GRCm38
Downstream plasmacytoma expressed transcript 2 Pet2 PC231, PC326, Pex3 643.7kb Sense Chr. - 89403848 - 89409689 on Build GRCm38

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