Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI157016.1	-	1	327		Chr. 9 - 79768627 - 79768991 [-] on Build GRCm38	66
GenBankmRNA	CA883761.1	-	1			Chr. 9 - 79768313 - 79768744 [+] on Build GRCm38	66
GenBankmRNA	BI901109.1	-	1			Chr. 9 - 79768309 - 79768835 [+] on Build GRCm38	66
GenBankmRNA	AA689995.1	-	1	97		Chr. 9 - 79768517 - 79768761 [-] on Build GRCm38	66
GenBankmRNA	BE986812.1	-	1			Chr. 9 - 79768301 - 79769037 [+] on Build GRCm38	66
GenBankmRNA	CB566185.1	-	1	419		Chr. 9 - 79768309 - 79769063 [-] on Build GRCm38	66
GenBankmRNA	AA289871.1	-	1	368		Chr. 9 - 79768513 - 79769032 [-] on Build GRCm38	66
GenBankmRNA	AV334659.2	-	1	539		Chr. 9 - 79768256 - 79769030 [-] on Build GRCm38	66
GenBankmRNA	BE985946.1	-	1			Chr. 9 - 79768301 - 79768953 [+] on Build GRCm38	66
GenBankmRNA	BM938637.1	-	1	525		Chr. 9 - 79768503 - 79769189 [-] on Build GRCm38	66
GenBankmRNA	CF744147.1	-	1	463		Chr. 9 - 79768372 - 79769127 [-] on Build GRCm38	66
GenBankmRNA	AA142508.1	-	1	257		Chr. 9 - 79768455 - 79768921 [-] on Build GRCm38	66
GenBankmRNA	AV027935.2	-	1	315		Chr. 9 - 79768318 - 79768979 [-] on Build GRCm38	66
GenBankmRNA	AW210597.1	-	1			Chr. 9 - 79768324 - 79768843 [+] on Build GRCm38	66
GenBankmRNA	BP770701.1	-	1			Chr. 9 - 79768301 - 79768869 [+] on Build GRCm38	66
GenBankmRNA	BM938079.1	-	1			Chr. 9 - 79768476 - 79768986 [+] on Build GRCm38	66

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	cytochrome c oxidase subunit VIIa 2	Cox7a2	COX7AL, Cox7a3, CoxVIIa-L	-8.4kb	Sense	Chr. - 79755241 - 79759853 on Build GRCm38
Downstream	RIKEN cDNA 4930429F24 gene	4930429F24Rik		23.7kb	Anti-sense	Chr. - 79793641 - 79803235 on Build GRCm38

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