Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AV317755.2	-	2	455		Chr. 6 - 54890059 - 54890749 [+] on Build GRCm38	87
GenBankmRNA	AA790403.1	-	1	124		Chr. 6 - 54890369 - 54890892 [+] on Build GRCm38	87
GenBankmRNA	CJ061054.1	-	1	267		Chr. 6 - 54890227 - 54890673 [+] on Build GRCm38	87
GenBankmRNA	BE864777.1	-	1	292		Chr. 6 - 54890202 - 54890701 [+] on Build GRCm38	87
GenBankmRNA	EH109114.1	-	1	390		Chr. 6 - 54890121 - 54890678 [+] on Build GRCm38	87
GenBankmRNA	BU698711.1	-	1	124		Chr. 6 - 54890372 - 54890876 [+] on Build GRCm38	87
GenBankmRNA	BB675617.1	-	1	134		Chr. 6 - 54890360 - 54890773 [+] on Build GRCm38	87
GenBankmRNA	CX729999.1	-	1	221		Chr. 6 - 54890273 - 54890891 [+] on Build GRCm38	87
GenBankmRNA	AA048429.1	-	1	82		Chr. 6 - 54890411 - 54890798 [+] on Build GRCm38	87
GenBankmRNA	BB324362.2	-	1	185		Chr. 6 - 54890312 - 54890950 [+] on Build GRCm38	87
GenBankmRNA	BU699828.1	-	1	122		Chr. 6 - 54890372 - 54890896 [+] on Build GRCm38	87

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Downstream	nucleotide-binding oligomerization domain containing 1	Nod1	C230079P11, Card4, F830007N14Rik, Nlrc1	33.0kb	Anti-sense	Chr. - 54923942 - 54972672 on Build GRCm38

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