Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: Nagk
Entrez Gene ID: 56174
Gene Name: N-acetylglucosamine kinase
Gene Aliases: Gnk
Chromosome Location: Chr.6: 83795031 - 83802556 on Build GRCm38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
GenBank mRNA	AK084646.1	-	1 - 1	1853	109

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	EH103078.1	-	1	551		Chr. 6 - 83796338 - 83796990 [+] on Build GRCm38	109
GenBankmRNA	AI481189.1	-	1			Chr. 6 - 83796605 - 83796993 [-] on Build GRCm38	109
GenBankmRNA	BB477472.2	-	1	548		Chr. 6 - 83796326 - 83796993 [+] on Build GRCm38	109
GenBankmRNA	AI482485.1	-	1			Chr. 6 - 83796633 - 83796999 [-] on Build GRCm38	109
GenBankmRNA	BY645188.1	-	1	318		Chr. 6 - 83796556 - 83796992 [+] on Build GRCm38	109
GenBankmRNA	BX636794.1	-	1			Chr. 6 - 83796737 - 83796997 [-] on Build GRCm38	109

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	testis expressed gene 261	Tex261	3110001O07Rik, AA409339, AI480706, AL033351, TEG-261	-19.2kb	Anti-sense	Chr. - 83768881 - 83775814 on Build GRCm38
Downstream	poly(A) binding protein interacting protein 2B	Paip2b		9.1kb	Anti-sense	Chr. - 83806058 - 83831741 on Build GRCm38

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