Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- Pcgf5
- Entrez Gene ID
-
76073
- Gene Name
- polycomb group ring finger 5
- Gene Aliases
-
0610009F02Rik, 1110054A01Rik, 5830406C17Rik, 5830443C21Rik, 9530023M17Rik, AI324127
- Chromosome Location
-
Chr.19: 36348084 - 36460970 on Build GRCm38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| GenBank mRNA |
AK040647.1 |
- |
1 - 1 |
2949 |
101 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BB733675.1 |
- |
1 |
221 |
|
Chr. 19 - 36458637 - 36459043 [+] on Build GRCm38 |
101 |
| GenBankmRNA |
CK392398.1 |
- |
1 |
240 |
|
Chr. 19 - 36458617 - 36459196 [+] on Build GRCm38 |
101 |
| GenBankmRNA |
BM899022.1 |
- |
1 |
|
|
Chr. 19 - 36458654 - 36459057 [-] on Build GRCm38 |
101 |
| GenBankmRNA |
BB735007.1 |
- |
1 |
209 |
|
Chr. 19 - 36458648 - 36459043 [+] on Build GRCm38 |
101 |
| GenBankmRNA |
BB212960.2 |
- |
1 |
457 |
|
Chr. 19 - 36458421 - 36459032 [+] on Build GRCm38 |
101 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
ankyrin repeat domain 1 (cardiac muscle) |
Ankrd1 |
Alrp, CARP, Crap, MARP1 |
-336.1kb
|
Anti-sense |
Chr. - 36111965 - 36119844 on Build GRCm38 |
| Downstream |
HECT domain containing 2 |
Hectd2 |
4921524L07, A630025O09Rik, AW212605 |
94.9kb
|
Sense |
Chr. - 36553969 - 36621135 on Build GRCm38 |
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