Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

A Gene Symbol is not available because the non-coding assay was designed to a GenBank RNA or EST accession that does not map to an Entrez Gene ID.



Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CK796290.1 - 199 Chr. - - [-] on Build 95
GenBankmRNA AA549672.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA549520.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA498962.1 - 54 Chr. - - [-] on Build 95
GenBankmRNA AA547108.1 - Chr. - - [-] on Build 95
GenBankmRNA AA415860.1 - 1 134 Chr. 6 - 79817956 - 79818277 [+] on Build GRCm38 95
GenBankmRNA CB849402.2 - 139 Chr. - - [-] on Build 95
GenBankmRNA BF681776.1 - 1 159 Chr. 6 - 79817956 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA529265.1 - 1 49 Chr. 6 - 79818067 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA547391.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AA422641.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA BU529320.1 - 72 Chr. - - [-] on Build 95
GenBankmRNA CB845176.2 - 141 Chr. - - [-] on Build 95
GenBankmRNA CB846006.2 - 381 Chr. - - [-] on Build 95
GenBankmRNA AA414066.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA BQ939551.1 - 251 Chr. - - [-] on Build 95
GenBankmRNA CD297912.1 - 91 Chr. - - [-] on Build 95
GenBankmRNA AA547328.1 - 133 Chr. - - [-] on Build 95
GenBankmRNA AA414666.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA536893.1 - 110 Chr. - - [-] on Build 95
GenBankmRNA CB173013.1 - 1 Chr. 6 - 79818032 - 79818343 [-] on Build GRCm38 95
GenBankmRNA AA624323.1 - 85 Chr. - - [-] on Build 95
GenBankmRNA CD769192.1 - 377 Chr. - - [-] on Build 95
GenBankmRNA AA681739.1 - 1 130 Chr. 6 - 79817970 - 79818347 [+] on Build GRCm38 95
GenBankmRNA C85677.2 - Chr. - - [-] on Build 95
GenBankmRNA AA590740.1 - 125 Chr. - - [-] on Build 95
GenBankmRNA AA275810.1 - 142 Chr. - - [-] on Build 95
GenBankmRNA AA574625.1 - 1 69 Chr. 6 - 79818029 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA681348.1 - 130 Chr. - - [-] on Build 95
GenBankmRNA BM204174.1 - Chr. - - [-] on Build 95
GenBankmRNA C86194.1 - 1 Chr. 6 - 79817922 - 79818347 [-] on Build GRCm38 95
GenBankmRNA AA544225.1 - 231 Chr. - - [-] on Build 95
GenBankmRNA AA547070.1 - 63 Chr. - - [-] on Build 95
GenBankmRNA AA271032.1 - 232 Chr. - - [-] on Build 95
GenBankmRNA BE914693.1 - 289 Chr. - - [-] on Build 95
GenBankmRNA CR513968.1 - 1 Chr. 6 - 79817946 - 79818347 [-] on Build GRCm38 95
GenBankmRNA BF681802.1 - 156 Chr. - - [-] on Build 95
GenBankmRNA AA571684.1 - 164 Chr. - - [-] on Build 95
GenBankmRNA AA561686.1 - 96 Chr. - - [-] on Build 95
GenBankmRNA AA415907.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA432894.1 - 1 102 Chr. 6 - 79817988 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA574901.1 - 298 Chr. - - [-] on Build 95
GenBankmRNA AA536702.1 - 113 Chr. - - [-] on Build 95
GenBankmRNA AA414426.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA289316.1 - 147 Chr. - - [-] on Build 95
GenBankmRNA AA105173.1 - 380 Chr. - - [-] on Build 95
GenBankmRNA BF583479.1 - 199 Chr. - - [-] on Build 95
GenBankmRNA BG088706.1 - Chr. - - [-] on Build 95
GenBankmRNA AA414813.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA BF100518.1 - 205 Chr. - - [-] on Build 95
GenBankmRNA BM243128.1 - Chr. - - [-] on Build 95
GenBankmRNA EL959803.1 - 267 Chr. - - [-] on Build 95
GenBankmRNA AA474326.1 - 1 134 Chr. 6 - 79817956 - 79818347 [+] on Build GRCm38 95
GenBankmRNA BM122136.1 - Chr. - - [-] on Build 95
GenBankmRNA AA645436.1 - 131 Chr. - - [-] on Build 95
GenBankmRNA AV482451.1 - 95 Chr. - - [-] on Build 95
GenBankmRNA BM118024.1 - Chr. - - [-] on Build 95
GenBankmRNA AU066650.1 - 283 Chr. - - [-] on Build 95
GenBankmRNA BF682331.1 - 1 Chr. 6 - 79817953 - 79818311 [-] on Build GRCm38 95
GenBankmRNA CB951612.1 - 214 Chr. - - [-] on Build 95
GenBankmRNA AA414599.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA066220.1 - 1 102 Chr. 6 - 79817988 - 79818339 [+] on Build GRCm38 95
GenBankmRNA AL022743.1 - 177 Chr. - - [-] on Build 95
GenBankmRNA AL022646.1 - 283 Chr. - - [-] on Build 95
GenBankmRNA AA623833.1 - 1 127 Chr. 6 - 79817970 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA432832.1 - 221 Chr. - - [-] on Build 95
GenBankmRNA AA261745.1 - 94 Chr. - - [-] on Build 95
GenBankmRNA AA545350.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA BM247279.1 - Chr. - - [-] on Build 95
GenBankmRNA AU080037.1 - 168 Chr. - - [-] on Build 95
GenBankmRNA BI734820.1 - 225 Chr. - - [-] on Build 95
GenBankmRNA AA683960.1 - 1 139 Chr. 6 - 79817953 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AV492381.1 - 289 Chr. - - [-] on Build 96
GenBankmRNA AA469550.1 - 282 Chr. - - [-] on Build 95
GenBankmRNA AA415494.1 - 1 133 Chr. 6 - 79817957 - 79818325 [+] on Build GRCm38 95
GenBankmRNA BG066701.1 - Chr. - - [-] on Build 95
GenBankmRNA CF617560.1 - Chr. - - [-] on Build 95
GenBankmRNA CB951686.1 - 360 Chr. - - [-] on Build 95
GenBankmRNA CB840924.1 - 612 Chr. - - [-] on Build 95
GenBankmRNA AA399771.1 - 251 Chr. - - [-] on Build 95
GenBankmRNA AA415349.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA CD769335.1 - 108 Chr. - - [-] on Build 95
GenBankmRNA AA416314.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA CB845091.2 - 71 Chr. - - [-] on Build 95
GenBankmRNA BU843473.1 - 78 Chr. - - [-] on Build 95
GenBankmRNA AV586820.1 - 409 Chr. - - [-] on Build 95
GenBankmRNA AA549215.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA BP772023.1 - Chr. - - [-] on Build 95
GenBankmRNA AA545566.1 - 133 Chr. - - [-] on Build 95
GenBankmRNA AI227304.1 - 331 Chr. - - [-] on Build 95
GenBankmRNA AA512167.1 - 1 60 Chr. 6 - 79818027 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA414594.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA672302.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA608179.1 - 71 Chr. - - [-] on Build 95
GenBankmRNA AA414709.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA674800.1 - 107 Chr. - - [-] on Build 95
GenBankmRNA CD769057.1 - 78 Chr. - - [-] on Build 95
GenBankmRNA EL961611.1 - 297 Chr. - - [-] on Build 95
GenBankmRNA CK789694.1 - 212 Chr. - - [-] on Build 95
GenBankmRNA AA980235.1 - 57 Chr. - - [-] on Build 95
GenBankmRNA BP770785.1 - Chr. - - [-] on Build 95
GenBankmRNA AA067332.1 - 1 77 Chr. 6 - 79818018 - 79818347 [+] on Build GRCm38 95
GenBankmRNA CB846263.2 - 216 Chr. - - [-] on Build 95
GenBankmRNA AA414707.1 - 47 Chr. - - [-] on Build 94
GenBankmRNA EL964792.1 - 202 Chr. - - [-] on Build 95
GenBankmRNA AU018745.1 - 1 Chr. 6 - 79817922 - 79818347 [-] on Build GRCm38 94
GenBankmRNA AA415732.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA CB845084.2 - 403 Chr. - - [-] on Build 95
GenBankmRNA AV463320.1 - 298 Chr. - - [-] on Build 95
GenBankmRNA AW045034.1 - 324 Chr. - - [-] on Build 95
GenBankmRNA EL965189.1 - 239 Chr. - - [-] on Build 95
GenBankmRNA CB845050.2 - 72 Chr. - - [-] on Build 95
GenBankmRNA AA793708.1 - 294 Chr. - - [-] on Build 95
GenBankmRNA AA623928.1 - 1 131 Chr. 6 - 79817970 - 79818347 [+] on Build GRCm38 95
GenBankmRNA CD769778.1 - 102 Chr. - - [-] on Build 95
GenBankmRNA AU014871.1 - Chr. - - [-] on Build 95
GenBankmRNA CD768514.1 - 417 Chr. - - [-] on Build 95
GenBankmRNA AA674590.1 - 1 135 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AU021405.1 - Chr. - - [-] on Build 95
GenBankmRNA BG144914.1 - 1 157 Chr. 6 - 79817935 - 79818190 [+] on Build GRCm38 95
GenBankmRNA EL964598.1 - 188 Chr. - - [-] on Build 95
GenBankmRNA AA545420.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA BI730297.1 - 304 Chr. - - [-] on Build 95
GenBankmRNA AA432540.1 - 1 61 Chr. 6 - 79818026 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA590637.1 - 145 Chr. - - [-] on Build 95
GenBankmRNA BF179803.1 - 61 Chr. - - [-] on Build 95
GenBankmRNA AK131588.1 - 250 Chr. - - [-] on Build 95
GenBankmRNA CK788757.1 - 513 Chr. - - [-] on Build 95
GenBankmRNA AA619770.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AV152438.1 - 137 Chr. - - [-] on Build 95
GenBankmRNA AA623709.1 - 1 133 Chr. 6 - 79817957 - 79818277 [+] on Build GRCm38 95
GenBankmRNA BU555518.1 - 77 Chr. - - [-] on Build 95
GenBankmRNA BG088577.1 - Chr. - - [-] on Build 95
GenBankmRNA CD769099.1 - 1 78 Chr. 6 - 79818018 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA606870.1 - 228 Chr. - - [-] on Build 95
GenBankmRNA AA413778.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA434920.1 - 248 Chr. - - [-] on Build 95
GenBankmRNA AA607134.1 - 76 Chr. - - [-] on Build 95
GenBankmRNA BP776867.1 - Chr. - - [-] on Build 95
GenBankmRNA AA272576.1 - 115 Chr. - - [-] on Build 95
GenBankmRNA CD768231.1 - 78 Chr. - - [-] on Build 95
GenBankmRNA EL962104.1 - 74 Chr. - - [-] on Build 95
GenBankmRNA AA422664.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AA675286.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA470262.1 - 1 144 Chr. 6 - 79817946 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AV465477.1 - 425 Chr. - - [-] on Build 95
GenBankmRNA C86677.1 - Chr. - - [-] on Build 95
GenBankmRNA CB849883.2 - 265 Chr. - - [-] on Build 95
GenBankmRNA AA794842.1 - 1 127 Chr. 6 - 79817963 - 79818332 [+] on Build GRCm38 95
GenBankmRNA AA684421.1 - 118 Chr. - - [-] on Build 95
GenBankmRNA AA545265.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA BF788637.1 - 81 Chr. - - [-] on Build 95
GenBankmRNA BP775415.1 - Chr. - - [-] on Build 95
GenBankmRNA CD768320.1 - 325 Chr. - - [-] on Build 95
GenBankmRNA AA415263.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA EL956470.1 - 203 Chr. - - [-] on Build 95
GenBankmRNA C87105.1 - Chr. - - [-] on Build 95
GenBankmRNA BG087311.1 - Chr. - - [-] on Build 95
GenBankmRNA AA624274.1 - 50 Chr. - - [-] on Build 95
GenBankmRNA BE289912.1 - 349 Chr. - - [-] on Build 95
GenBankmRNA AA681673.1 - 1 133 Chr. 6 - 79817957 - 79818292 [+] on Build GRCm38 95
GenBankmRNA AI746690.1 - 296 Chr. - - [-] on Build 95
GenBankmRNA AA530188.1 - 368 Chr. - - [-] on Build 95
GenBankmRNA BG087965.1 - Chr. - - [-] on Build 95
GenBankmRNA AA435194.1 - 252 Chr. - - [-] on Build 95
GenBankmRNA AA422981.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AA414818.1 - 1 127 Chr. 6 - 79817963 - 79818344 [+] on Build GRCm38 95
GenBankmRNA BG800845.1 - 349 Chr. - - [-] on Build 95
GenBankmRNA EL962497.1 - 68 Chr. - - [-] on Build 95
GenBankmRNA AA672148.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA433638.1 - 52 Chr. - - [-] on Build 95
GenBankmRNA CB598345.1 - 132 Chr. - - [-] on Build 95
GenBankmRNA AA437607.1 - 1 127 Chr. 6 - 79817963 - 79818342 [+] on Build GRCm38 95
GenBankmRNA AA437867.1 - 1 127 Chr. 6 - 79817963 - 79818347 [+] on Build GRCm38 95
GenBankmRNA BI111710.1 - 191 Chr. - - [-] on Build 95
GenBankmRNA AA536861.1 - 110 Chr. - - [-] on Build 95
GenBankmRNA AA420058.1 - 1 218 Chr. 6 - 79817916 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA414918.1 - 1 127 Chr. 6 - 79817963 - 79818310 [+] on Build GRCm38 95
GenBankmRNA AA422960.1 - 87 Chr. - - [-] on Build 95
GenBankmRNA CB574574.1 - 229 Chr. - - [-] on Build 95
GenBankmRNA BI452717.1 - 1 194 Chr. 6 - 79817916 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA681401.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AA465834.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AA546552.1 - 49 Chr. - - [-] on Build 95
GenBankmRNA BG247000.1 - 197 Chr. - - [-] on Build 95
GenBankmRNA CD768960.1 - 72 Chr. - - [-] on Build 95
GenBankmRNA AV490905.1 - 1 145 Chr. 6 - 79817946 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA545287.1 - 127 Chr. - - [-] on Build 95
GenBankmRNA AI315978.1 - 332 Chr. - - [-] on Build 95
GenBankmRNA AA106520.1 - 274 Chr. - - [-] on Build 95
GenBankmRNA AA549309.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA CD768971.1 - 83 Chr. - - [-] on Build 95
GenBankmRNA C81559.1 - Chr. - - [-] on Build 95
GenBankmRNA AA435429.1 - 1 60 Chr. 6 - 79818027 - 79818347 [+] on Build GRCm38 95
GenBankmRNA AA412905.1 - 202 Chr. - - [-] on Build 95
GenBankmRNA AA549027.1 - 1 133 Chr. 6 - 79817957 - 79818347 [+] on Build GRCm38 95
GenBankmRNA CB595965.1 - 374 Chr. - - [-] on Build 95
GenBankmRNA AA388425.1 - 1 78 Chr. 6 - 79818022 - 79818281 [+] on Build GRCm38 96
GenBankmRNA AA416353.1 - 1 127 Chr. 6 - 79817963 - 79818315 [+] on Build GRCm38 95
GenBankmRNA AA563107.1 - 46 Chr. - - [-] on Build 95
GenBankmRNA CD769500.1 - 73 Chr. - - [-] on Build 95


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream predicted gene, 20362 Gm20362 -782.1kb Sense Chr. - 79032042 - 79035869 on Build GRCm38
Downstream leucine rich repeat transmembrane neuronal 4 Lrrtm4 7530419J18Rik, A230052N11 200.5kb Sense Chr. - 80018859 - 80810162 on Build GRCm38

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